Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38101.1
DDBJ : protein of unknown function DUF107
Swiss-Prot:
Homologs Archaea 0/68 : Bacteria 65/915 : Eukaryota 0/199 : Viruses 0/175 --->[See Alignment]
b.40.12
:149 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB 94->146 3cp0A PDBj 8e-10 24.5 %
:RPS:SCOP 93->146 2exdA1 b.40.12.1 * 5e-04 24.5 %
:HMM:PFM 13->147 PF01957 * NfeD 7.4e-31 29.7 128/144
:BLT:SWISS 81->146 YBBJ_SHIFL 4e-09 36.4 %
:TM
:SEG
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38101.1
GT:GENE ABE38101.1
GT:PRODUCT protein of unknown function DUF107
GT:DATABASE GIB00345CH01
GT:ORG rpal2
GB:ACCESSION GIB00345CH01
GB:LOCATION 967782..968231
GB:FROM 967782
GB:TO 968231
GB:DIRECTION +
GB:PRODUCT protein of unknown function DUF107
GB:PROTEIN_ID ABE38101.1
GB:DB_XREF GI:91681799 InterPro:IPR002810
LENGTH 149
SQ:AASEQ MLDMLGALGPWNWLIIGFVLMALELLAPGIFLFWLGLAALLSGLAAFALHLSWQLQILLFALFAVAAVPLWRRMARGGAAESNATNPFLNRRADALVGRIFTLEKPIVDGVGTVRIDDTFWRVTGPDAPAGSRVKIVQADGVNLTVAGA
GT:EXON 1|1-149:0|
BL:SWS:NREP 1
BL:SWS:REP 81->146|YBBJ_SHIFL|4e-09|36.4|66/152|
TM:NTM 3
TM:REGION 2->24|
TM:REGION 28->50|
TM:REGION 53->71|
SEG 29->51|giflfwlglaallsglaafalhl|
SEG 58->70|llfalfavaavpl|
RP:PDB:NREP 1
RP:PDB:REP 94->146|3cp0A|8e-10|24.5|53/62|
HM:PFM:NREP 1
HM:PFM:REP 13->147|PF01957|7.4e-31|29.7|128/144|NfeD|
RP:SCP:NREP 1
RP:SCP:REP 93->146|2exdA1|5e-04|24.5|53/72|b.40.12.1|
OP:NHOMO 65
OP:NHOMOORG 65
OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-111111111111111111------1-111--11111111111111---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------1---------------------------------------------------------------------------------1---------1-------------------------------1111-1--1---------------------------1----11-11111111111----------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 53
STR:RPRED 35.6
SQ:SECSTR #############################################################################################GGGTTcEEEEEEcccccccEEEETTEEEEETTccccTTcEEEEEEEETTEEEE###
DISOP:02AL 76-91|
PSIPRED cHHHHHcccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccccccccccHHHEEEccEEEEEEEEEccEEEEEEccEEEEEEccccccccEEEEEEEcccEEEEEEc
//
[GTOP]
