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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38106.1
DDBJ      :             diguanylate cyclase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  635/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
d.110.6d.58.29
:494 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   327->458 3i5aA PDBj 2e-31 50.0 %
:RPS:PDB   46->284 3c8cA PDBj 2e-16 10.6 %
:RPS:PDB   255->459 3btaA PDBj 2e-39 7.9 %
:RPS:SCOP  41->193 2p7jA2  d.110.6.2 * 6e-11 11.1 %
:RPS:SCOP  330->486 1w25A3  d.58.29.2 * 2e-29 34.6 %
:HMM:SCOP  330->487 1w25A3 d.58.29.2 * 4.9e-51 46.2 %
:RPS:PFM   328->480 PF00990 * GGDEF 2e-26 46.4 %
:HMM:PFM   325->479 PF00990 * GGDEF 2.8e-45 45.5 154/161  
:BLT:SWISS 328->453 PHY2_SYNY3 7e-27 47.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38106.1 GT:GENE ABE38106.1 GT:PRODUCT diguanylate cyclase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 973066..974550 GB:FROM 973066 GB:TO 974550 GB:DIRECTION + GB:PRODUCT diguanylate cyclase GB:PROTEIN_ID ABE38106.1 GB:DB_XREF GI:91681804 InterPro:IPR000160 LENGTH 494 SQ:AASEQ MRKEIGRRRRMSARLLIASSVITVLGFSAVCGSIMLDMRGNAQELARQTQENLASTISADINRNIEAYDLSLRSVVSNLALPQLAHVDETLRRLILFDHASIARHFGSIQVFDAQGNLTIDSATLTPEKLNRGDEPFVSAHRDDPTVGLYISRPMQHRGTFAIVLSRRISGTDGRFLGVVAGSIRFSYFKQVFSRLRLEPDDTIGVVARDGTLVMRTPFRPDVIGTNVMGAPGVRQVFSQRRGWYSGEGIIDQIPRMMVWADGTRPLVVIVGKSWSDVFRMWRHEAIRISLILLGLAIIVAGFTVFFIREIDRRAEAERRLEELATTDSLTGLINRRKFDTLIEREWRRALRMNTPIALLIIDADHFKAFNDGYGHQAGDQVLVGIALCIGDSVQRAGDCAARFGGEEFAVLLPGGSATAAQGVAETIRNKVAHWSVGQGDVTVSIGVASMTPAPGQHWPVLFEAADKALYAAKDLGRNCCVVAASRHDLTLAA GT:EXON 1|1-494:0| BL:SWS:NREP 1 BL:SWS:REP 328->453|PHY2_SYNY3|7e-27|47.6|126/1276| TM:NTM 2 TM:REGION 15->37| TM:REGION 288->310| SEG 286->301|airislillglaiiva| SEG 308->325|ireidrraeaerrleela| SEG 465->476|aadkalyaakdl| BL:PDB:NREP 1 BL:PDB:REP 327->458|3i5aA|2e-31|50.0|132/319| RP:PDB:NREP 2 RP:PDB:REP 46->284|3c8cA|2e-16|10.6|227/238| RP:PDB:REP 255->459|3btaA|2e-39|7.9|203/1277| RP:PFM:NREP 1 RP:PFM:REP 328->480|PF00990|2e-26|46.4|151/160|GGDEF| HM:PFM:NREP 1 HM:PFM:REP 325->479|PF00990|2.8e-45|45.5|154/161|GGDEF| RP:SCP:NREP 2 RP:SCP:REP 41->193|2p7jA2|6e-11|11.1|153/172|d.110.6.2| RP:SCP:REP 330->486|1w25A3|2e-29|34.6|156/162|d.58.29.2| HM:SCP:REP 330->487|1w25A3|4.9e-51|46.2|156/0|d.58.29.2|1/1|Nucleotide cyclase| OP:NHOMO 6802 OP:NHOMOORG 643 OP:PATTERN -------------------------------------------------------------------- F9128---111---13211-18----11111-91111954975KX-------524-----852-7194432---------41669H45-------------------------------------11111111161BBB8A11163jMOBHH123DC---3--5F7-AAF3------------K6B54981482333333542353445-222223354449-BD333333A9-1111111111111111111--2--------33---1--1--------------------------------------------------38669444444433437443454428--54469DCEB774A7522332--A285662-----15OLO53EPLGKP3477367567H-PNILLAMJ8R5-CLLKNOIMOTA7OC5A8262BC89654--------9991-d9O11111111111111111111111-11111-42E929A841GCDEEED777699LS888828GQMDJEL-2KLGRGWGJP11b88OMQSGROUH-------36BIfm4HPHIGJO9gPHFI1IGKWHNFUN6555A664C543----------------OAEI632USFOYReDZMZfZbbYWdRbaaSWUWTRlg---8RBa------AEFA2H7BBBABAAACA-ABACB77ABAB9AABBAABADABD--16467666666566676A6556468--D23333333333---M-----ACBAC8eDe---------------6566625-1-EUNNMMRTVUWTTRSNQQU-----1---PJMJKOONNNJSNaaKKIIGIGABB1111--X26655CC-1111111411-------------------------8723466666-1- -----------------------------------------------------------------------------------------------1--------------------------------------------------------------1----4---------42----------1--6-----6---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 449 STR:RPRED 90.9 SQ:SECSTR #####################################GTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcHHHHHHHHccHHHHHHcccEEEEETTTccEEccTTccccccccGGGcHHHHHHHHHTccEEcccEEcTTTccEEEEEEEEEcTTTccEEEEEEEEEcHHHHHHHHTccccTTcEEEEEEETTccEEEcccGcGGGTTccHHHHcccccccccEEEEETTEcccccccccEEEEEcccccccccEEEEEEETTEEEEEEEcccccGGGccccccccccccccccccTTTTccHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHccccccTTccTTcccccGGGEEEEEcTTccEEEEEccHHEEEEEccccTTccEEEccccccccTTTccccccEEEEccccEEcEEcGGGTcTTcccccEEccHHHHHHHHHHHHHHHHHHHHTTTcccEEEEEc######## DISOP:02AL 1-5,85-86,88-88,491-495| PSIPRED cccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccccEEEEEcccccEEEEccccccccccccHHHHHHHHHcccccccEEcccEEccccEEEEEEEEEccccccEEEEEEEEEcHHHHHHHHHHcccccccEEEEEEcccEEEEEEccccccccEEccccHHHHHHHcccccEEEEEEccccEEEEEEEEcccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHccccccEEEEEccEEEEEEcccccHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHccccEEEEccccccccccc //