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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38120.1
DDBJ      :             short-chain dehydrogenase/reductase SDR
Swiss-Prot:             

Homologs  Archaea  52/68 : Bacteria  870/915 : Eukaryota  189/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:268 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->254 2b4qA PDBj 6e-48 43.1 %
:RPS:PDB   8->254 3bmoB PDBj 7e-35 17.4 %
:RPS:SCOP  7->254 1bdbA  c.2.1.2 * 5e-33 22.1 %
:HMM:SCOP  6->254 1zemA1 c.2.1.2 * 1.6e-70 38.0 %
:RPS:PFM   11->181 PF00106 * adh_short 2e-18 37.0 %
:HMM:PFM   12->183 PF00106 * adh_short 1.8e-33 24.1 162/167  
:BLT:SWISS 6->254 RHLG_PSEAE 2e-47 43.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38120.1 GT:GENE ABE38120.1 GT:PRODUCT short-chain dehydrogenase/reductase SDR GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(994467..995273) GB:FROM 994467 GB:TO 995273 GB:DIRECTION - GB:PRODUCT short-chain dehydrogenase/reductase SDR GB:PROTEIN_ID ABE38120.1 GB:DB_XREF GI:91681818 InterPro:IPR002198 InterPro:IPR002347 LENGTH 268 SQ:AASEQ MFKDLFSLQGRVAVVTGGSRGIGKMIASGFLAYGAARVYITARKAAACEATAAELTAQHPGECIALPIDISTMAGIEMLAKEIATREPKLDILVNNAGAAWAADFDEFPENGWDKVMDLNVKTPFFLTKALAGPLRAAATAERPGKVINIASIDGIFVNPLETYPYAASKAGLIHLTRRLAVRLIKDHIVVTAIAPGPFASDMNKAARDEADAVAKRVPSGRIGTDEDMAGTAIYLASRAGDYVVGATIAVDGGVVYANPGFTGDSWA GT:EXON 1|1-268:0| BL:SWS:NREP 1 BL:SWS:REP 6->254|RHLG_PSEAE|2e-47|43.1|246/256| SEG 41->57|tarkaaaceataaelta| SEG 130->141|alagplraaata| BL:PDB:NREP 1 BL:PDB:REP 6->254|2b4qA|6e-48|43.1|246/256| RP:PDB:NREP 1 RP:PDB:REP 8->254|3bmoB|7e-35|17.4|242/248| RP:PFM:NREP 1 RP:PFM:REP 11->181|PF00106|2e-18|37.0|165/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 12->183|PF00106|1.8e-33|24.1|162/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 7->254|1bdbA|5e-33|22.1|240/267|c.2.1.2| HM:SCP:REP 6->254|1zemA1|1.6e-70|38.0|242/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 11277 OP:NHOMOORG 1111 OP:PATTERN 221-11367575655319-311117227264622---------21132--322-22111-32753-22 AGR4N1-355C232NVTBB-BY33MxBABBBHbgjiPX*t5S8qEGB43B61HAF54711CGN28DJLRIC1---1121185O11232677725221--64K3A9d8Q5G11111111111111243246422574BAADE222EA96B93252322211422221B95M4111111111111A9756661D5JEEEEEFDGEEFEFGDMELLHJEEEAGHJDE7656666DW655555445555554A889A51A15415111454436454678444545233322222222222222343343444444412211122234358B555444454783551464633114721286123324332335422A2CZDDJ12112I7xYY57CTMPPKHIIHGGIHIIP-FIOGEgFMOiR1sXXKUQdoljjiQWAJAGFLJBILGAH77777777LQL869B8111111111112223312211221211119DZnG6GZSKYrgmllnGNMNMZZkmPOOOAPxO*QwhV36NLKE7GBBRHVDcd7B75838841111111226HB76G4431211-422324652D33737766GK3312211221121111111111211216688878CC6G62699795CA977897789481-2333711-1119AAA6E89AAB9999AA-AA9AA899A9A9AA98A9BJKKC63787456667677656566O776776731988888888888111534233777838ILD111516122211341EGHIG5C385K8KKHJEMOXDHINHEJFJ5232243223333B4344356467ECFCHBA9AA65551243556544--------1-3----------1--------------32421555652A1 11--679-111-49AagbYUPXQnenbIIBGFGHDGGPGMFLLFGGMPPWXg*rJNMHFJGH87E3552A32C89212224889FA18-LbFgDXEGAECB9BGD9-9H7qCMEEB64-21262A7-7-BN6-5681151823B517423A1275666LaXM4MIDAA6858NFH4583g3336FBFDaUP898S9B99 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 268 STR:RPRED 100.0 SQ:SECSTR ccGGGTcccccEEEETTcccHHHHHHHHHHHHHTcEEEEEEcccHHHHHHHHHHHHHHcTTcEEEEEccccccTTHHHHHHHHHHHHHHHHccccEEEEccccccccccccccHHHHHHHHHHHHTHHHHHHHHHHHHHccTccEEEEEEccTTTTccTTTTcHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEccccccTTccHHHHHHHHHTcTTTcccccHHHHHHHHHHHHcGGGTTccccEEEEcTTGGTGccccHHHHcc DISOP:02AL 1-1,264-269| PSIPRED cccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHccHHHHHHHcccccEEEEEccccEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEccccccccHHHccHHHHHHHHHcccccccccHHHHHHHHHHHHcHHHccccccEEEEcccEEEEcccccccccc //