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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38142.1
DDBJ      :             2-deoxycytidine 5-triphosphate deaminase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  72/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.85.4
:388 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   31->372 2r9qB PDBj e-117 62.2 %
:RPS:PDB   56->188 1dupA PDBj 2e-13 22.0 %
:RPS:PDB   271->369 1ducA PDBj 7e-13 17.4 %
:RPS:SCOP  32->188 1xs1A  b.85.4.1 * 1e-31 29.1 %
:RPS:SCOP  271->369 1ducA  b.85.4.1 * 3e-13 17.4 %
:HMM:SCOP  31->197 1oghA_ b.85.4.1 * 1e-28 34.4 %
:HMM:SCOP  234->365 1oghA_ b.85.4.1 * 1.3e-18 29.8 %
:RPS:PFM   31->387 PF06559 * DCD e-134 73.6 %
:HMM:PFM   28->388 PF06559 * DCD 1.6e-187 70.6 360/366  
:BLT:SWISS 32->188 DCD_COPPD 6e-10 32.7 %
:BLT:SWISS 268->378 DCD_MICLC 2e-08 38.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38142.1 GT:GENE ABE38142.1 GT:PRODUCT 2-deoxycytidine 5-triphosphate deaminase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1017635..1018801 GB:FROM 1017635 GB:TO 1018801 GB:DIRECTION + GB:PRODUCT 2-deoxycytidine 5-triphosphate deaminase GB:PROTEIN_ID ABE38142.1 GB:DB_XREF GI:91681840 InterPro:IPR010550 LENGTH 388 SQ:AASEQ MKSCIFSASGGPAAAVRIAAVPFALPPDADGILPDRMIAAMAEAGLILPEYPFVESQIQPASLDLRLGAVAYRVRASFLPGPDCTVAERIDELKLHEIDLSDGAVLETNCVYIVPLLESLALPRSIVAAANPKSSTGRLDVFTRVIADGTRRFDMIGAGYHGPLYAEISPKTFPVLLREGSRLSQVRFRTGHATLDADELDALHDLERLVDADDADLNGGVALSVDLSGENSNGFVGYRAKRHTGVVDVDRRGGYAVGEFWEPIAARPDGTLILDPGEFYILASKEAVQVPPDYAAEMVPFDPLVGEFRVHYAGFFDPGFGYEGAGGLGSRAVLEVRSREVPFILEHGQIVGRLIYEKMLSRPASLYGQRIGSNYQGQSLKLSKHFKA GT:EXON 1|1-388:0| BL:SWS:NREP 2 BL:SWS:REP 32->188|DCD_COPPD|6e-10|32.7|147/186| BL:SWS:REP 268->378|DCD_MICLC|2e-08|38.5|104/193| SEG 8->24|asggpaaavriaavpfa| SEG 195->207|ldadeldalhdle| BL:PDB:NREP 1 BL:PDB:REP 31->372|2r9qB|e-117|62.2|339/342| RP:PDB:NREP 2 RP:PDB:REP 56->188|1dupA|2e-13|22.0|118/136| RP:PDB:REP 271->369|1ducA|7e-13|17.4|92/118| RP:PFM:NREP 1 RP:PFM:REP 31->387|PF06559|e-134|73.6|352/356|DCD| HM:PFM:NREP 1 HM:PFM:REP 28->388|PF06559|1.6e-187|70.6|360/366|DCD| RP:SCP:NREP 2 RP:SCP:REP 32->188|1xs1A|1e-31|29.1|151/193|b.85.4.1| RP:SCP:REP 271->369|1ducA|3e-13|17.4|92/118|b.85.4.1| HM:SCP:REP 31->197|1oghA_|1e-28|34.4|160/175|b.85.4.1|1/2|dUTPase-like| HM:SCP:REP 234->365|1oghA_|1.3e-18|29.8|121/175|b.85.4.1|2/2|dUTPase-like| OP:NHOMO 73 OP:NHOMOORG 72 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111111111111111111111111111111-111121111111111111111111111111111111111---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 355 STR:RPRED 91.5 SQ:SECSTR ########################ccTTEEEEEEEEccccEEccEEEcTTccEEEcccEEEEccTTcTTTccEEEEEcccccccTTcccEEEcccEEccccccEEEcTTcEEEEEEEEEEEcccTTEEEEEEcHHHHHHHcEEETTccEEcccEEEcTTcccEEEEEEEEccccEEEcTTcEEEEEEEEEccccccHHHHHHHHHHccccccccccccccEEEEccccccTTTTEEEEEEccccccEETTcGGGccGGGTcccEEEEccccEEEcTTcEEEEEcccEEEccTTEEEEEEccHHHHTTTEEEEccEEcTTcTcccTTcccccEEEEEEcccccEEEcTTcEEEEEEEEEcccccccccccTEETTTTccc######### DISOP:02AL 1-3,7-7,365-374,388-389| PSIPRED ccEEEEEccccccEEEEEEEEEEEccccccccccHHHHHHHHHcccEEccccccHHHccccEEEEEEccEEEEEEcccccccccccHHcccccccEEEcccccEEEccccEEEEEEEEEEEcccccEEEEEEccccEEccEEEEccccccccccEEccccccEEEEEEEcccccEEEccccEEEEEEEEcccccccHHHHHHHHcccHHHccccccccccEEEEEEEEcccccEEEEEEcccccEEEEccccccccHHHHEEEEEEcccccEEEccccEEEEEEEEEEEccHHHEEEEEcccccEEEEEEEEccEEccccccccccccccEEEEEEEcccccEEEEcccEEEEEEEHHHcccccccccccccccccccccccHHHHcc //