[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38163.1
DDBJ      :             glutamyl-tRNA synthetase, class Ic
Swiss-Prot:             

Homologs  Archaea  15/68 : Bacteria  879/915 : Eukaryota  170/199 : Viruses  0/175   --->[See Alignment]
c.26.1
:293 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->263 2cfoB PDBj 5e-31 35.3 %
:RPS:PDB   3->263 2ag6A PDBj 5e-25 11.7 %
:RPS:SCOP  5->264 1g59A2  c.26.1.1 * 5e-54 35.4 %
:HMM:SCOP  3->289 1j09A2 c.26.1.1 * 1.2e-78 45.8 %
:RPS:PFM   7->263 PF00749 * tRNA-synt_1c 1e-41 43.2 %
:HMM:PFM   7->269 PF00749 * tRNA-synt_1c 1.6e-55 34.3 248/314  
:BLT:SWISS 7->263 GLUQ_SYMTH 9e-38 42.3 %
:PROS 10->21|PS00178|AA_TRNA_LIGASE_I
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38163.1 GT:GENE ABE38163.1 GT:PRODUCT glutamyl-tRNA synthetase, class Ic GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1043563..1044444 GB:FROM 1043563 GB:TO 1044444 GB:DIRECTION + GB:PRODUCT glutamyl-tRNA synthetase, class Ic GB:PROTEIN_ID ABE38163.1 GB:DB_XREF GI:91681861 InterPro:IPR000924 InterPro:IPR001412 LENGTH 293 SQ:AASEQ MPPPVFRFAPSPNGYLHLGHAYSALLNFDLARASGGRLLLRIEDIDRARCRPDYEQAIYQDLAWLGIRWEPEVRRQSDHFALYRAAVEQLAAQGLVYPAFESRAEIARQVAARQVAGPWPHDPDGAPLYPGAGKQLDPDERERLIGSGAPYALRLDMTAACALAGDLFWDERGHGPDSETGMVSARPEAWGDVVIARKETPTSYHLSVVIDDALQGVTEVVRGADLFWSTSVHRLLQTLLGLPAPVYRHHPLLRDGEGRKLSKSSGATGLRALRAAGVGSEDVRKMIGLATPA GT:EXON 1|1-293:0| BL:SWS:NREP 1 BL:SWS:REP 7->263|GLUQ_SYMTH|9e-38|42.3|239/323| PROS 10->21|PS00178|AA_TRNA_LIGASE_I|PDOC00161| SEG 30->41|larasggrlllr| SEG 266->279|gatglralraagvg| BL:PDB:NREP 1 BL:PDB:REP 7->263|2cfoB|5e-31|35.3|241/487| RP:PDB:NREP 1 RP:PDB:REP 3->263|2ag6A|5e-25|11.7|257/307| RP:PFM:NREP 1 RP:PFM:REP 7->263|PF00749|1e-41|43.2|241/309|tRNA-synt_1c| HM:PFM:NREP 1 HM:PFM:REP 7->269|PF00749|1.6e-55|34.3|248/314|tRNA-synt_1c| GO:PFM:NREP 6 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00749|IPR020058| GO:PFM GO:0005524|"GO:ATP binding"|PF00749|IPR020058| GO:PFM GO:0005737|"GO:cytoplasm"|PF00749|IPR020058| GO:PFM GO:0006412|"GO:translation"|PF00749|IPR020058| GO:PFM GO:0016876|"GO:ligase activity, forming aminoacyl-tRNA and related compounds"|PF00749|IPR020058| GO:PFM GO:0043039|"GO:tRNA aminoacylation"|PF00749|IPR020058| RP:SCP:NREP 1 RP:SCP:REP 5->264|1g59A2|5e-54|35.4|237/305|c.26.1.1| HM:SCP:REP 3->289|1j09A2|1.2e-78|45.8|264/0|c.26.1.1|1/1|Nucleotidylyl transferase| OP:NHOMO 1958 OP:NHOMOORG 1064 OP:PATTERN --------------1-----------------111111-11--111-1--------------11---- 332112222222222------2--12------2222222211--11211111222212111112111111-12222222222211111222212221--121212212221111111111111111111111111111111111-1111111111222222221111111112211112112133312111311111111111111111211111111111111111111122111111111111111111111121111111-11111111111111111111111111111111111111111111111111-1111111132211111111111111--22221121122121222223111-2223111313222122222333333333333333333333333-33333433333122222221222223223333333333333333333333333332211122222222122222221221222213233222212222222222222233222222223333322333212222222133323223333333323323332212122433323332333333323333332321222222221211111111121211333231332333323323322222331333231-2233322111133333323333333333-333333333333333333333333332333333333333333333333333213333333333331113222222222323332222222222222223332333333333333333333333333322222222222333333333333333333333332222112111--111111111111-11111-111-1111111--1111112122221222-23 12--112-3-2---1111111111-1111111111111111111111-111111111-1-111111111-11-1111-111111111-----11112221112111-13121312111-1111112-313A111121111112-1-111-1111111121121112-111-11-11111H11-2213321111221113 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 292 STR:RPRED 99.7 SQ:SECSTR cccEEEEEEEcccccccHHHHHHHHHHHHHHHTTEEEEEEEcHHcccHHHHHHHHHHHHHHHHHTTcccEEEEGGGTTTcHHHHHHHHHHHHHccHHHHHHHTTTTccccccccTHHHHHHHHHTcGGcTTccEEEEEGGGHHHHHHHHHHcccccEEEcccEEcccccTTccccccGGGTcccccTTccHHHHHHHHHHccccTTccTTcHHHHHHHHHccccEEEcccGGGTccEEEccHHHHHHHTTcccHHHHHHHHHHTTTccccHHHHHHHHcHHHHHHHHHHHcc# DISOP:02AL 1-1,107-124,293-294| PSIPRED ccccEEEEcccccccccHHHHHHHHHHHHHHHccccEEEEEEEccccccccHHHHHHHHHHHHHccccccccEEEEcccHHHHHHHHHHHHHcccccEEcccHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHcccccEEEEEEccccccccEEcccccccccccccEEEEEEcHHHccccEEEEcccccHHHcHHHHHHHHccccEEEEccccccccHHHHHHHHHccccccEEEEEEEEEcccccEEEEccccHHHHHHHHccccHHHHHHHHcccccc //