[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38177.1
DDBJ      :             4-carboxymuconolactone decarboxylase
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  224/915 : Eukaryota  23/199 : Viruses  0/175   --->[See Alignment]
a.152.1
:126 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   30->124 2af7F PDBj 2e-09 30.1 %
:RPS:PDB   6->124 2af7F PDBj 1e-30 32.5 %
:RPS:SCOP  6->122 2af7A1  a.152.1.2 * 9e-35 32.8 %
:HMM:SCOP  3->122 2af7A1 a.152.1.2 * 8.2e-33 34.5 %
:RPS:PFM   57->108 PF02627 * CMD 3e-06 40.4 %
:HMM:PFM   36->118 PF02627 * CMD 1.6e-25 35.4 82/85  
:BLT:SWISS 2->123 DC4C_ACIAD 1e-24 36.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38177.1 GT:GENE ABE38177.1 GT:PRODUCT 4-carboxymuconolactone decarboxylase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(1055236..1055616) GB:FROM 1055236 GB:TO 1055616 GB:DIRECTION - GB:PRODUCT 4-carboxymuconolactone decarboxylase GB:PROTEIN_ID ABE38177.1 GB:DB_XREF GI:91681875 InterPro:IPR003779 LENGTH 126 SQ:AASEQ MDKTTHDKGLDIRKAVLGEAYVENALKNSDDFNKPFQELVTEYCWGAIWGREELPRKTRSMLNLAMIAILNRPHELRAHIKGALTNGVTKDEIREIFMQVACYAGIPAGVDSFRIARDVFAELDKA GT:EXON 1|1-126:0| BL:SWS:NREP 1 BL:SWS:REP 2->123|DC4C_ACIAD|1e-24|36.9|122/134| BL:PDB:NREP 1 BL:PDB:REP 30->124|2af7F|2e-09|30.1|93/116| RP:PDB:NREP 1 RP:PDB:REP 6->124|2af7F|1e-30|32.5|114/116| RP:PFM:NREP 1 RP:PFM:REP 57->108|PF02627|3e-06|40.4|52/83|CMD| HM:PFM:NREP 1 HM:PFM:REP 36->118|PF02627|1.6e-25|35.4|82/85|CMD| RP:SCP:NREP 1 RP:SCP:REP 6->122|2af7A1|9e-35|32.8|116/119|a.152.1.2| HM:SCP:REP 3->122|2af7A1|8.2e-33|34.5|119/0|a.152.1.2|1/1|AhpD-like| OP:NHOMO 435 OP:NHOMOORG 257 OP:PATTERN -------11111111--1----------------1--------------------------------- --2-1--1221--1--1----2---2------2323-322---4-1------1211------1-111331------------1----------1-----------------------------------------------------------------1-----------------------211---------------------------------------------2--------------------1--1----1-----11----1-------------------------------------------------1----2------------11----------------------------------111--------311--11-121111111111-1---2--1-141--12214421221121---123----113--------21--21----------------------------------2---42123332441233344223333133251221--32121---222121--------1-----------11--1----------1----------------------------------------------11---2----12122-1-121-21----1------1------11----1-----------------------------2332--1------------------1----------22222222222----------------12---------------33323231111-22223232223241222-------------1------1---1-11111111--------------------------------1------------------------------ -------------1--1211--11112---------1111111--------143--------------------------------------1---------1--------------------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 126 STR:RPRED 100.0 SQ:SECSTR ccHHcTHHHHHHHHTcHHHHGGGTccTHHHTTcTTHHHHHHHcccccccTcccccHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHTcccHH DISOP:02AL 1-3,125-127| PSIPRED ccHHHHHHHHHHHHHHHcHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcc //