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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38235.1
DDBJ      :             electron transport protein SCO1/SenC
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  342/915 : Eukaryota  185/199 : Viruses  0/175   --->[See Alignment]
c.47.1
:199 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   44->199 2gqkA PDBj 2e-34 41.7 %
:RPS:PDB   47->199 2b7jA PDBj 3e-18 36.9 %
:RPS:SCOP  46->197 1wp0A1  c.47.1.10 * 1e-23 42.1 %
:HMM:SCOP  40->199 2b7kA1 c.47.1.10 * 2e-49 43.1 %
:RPS:PFM   44->179 PF02630 * SCO1-SenC 1e-41 53.7 %
:HMM:PFM   41->184 PF02630 * SCO1-SenC 3.2e-48 43.8 144/174  
:BLT:SWISS 42->196 SCO22_RICBR 3e-35 41.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38235.1 GT:GENE ABE38235.1 GT:PRODUCT electron transport protein SCO1/SenC GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1126348..1126947 GB:FROM 1126348 GB:TO 1126947 GB:DIRECTION + GB:PRODUCT electron transport protein SCO1/SenC GB:PROTEIN_ID ABE38235.1 GB:DB_XREF GI:91681933 InterPro:IPR003782 LENGTH 199 SQ:AASEQ MAAEARPTRPIVIIAAFAGSLIVGLVVLLWLLGGLEKVAAPATIGGPFQLTDQNGQVVTEQSLKGKPTLIFFGFTHCPDICPTALFEISQVLQALGKDADRINAYFVSVDPERDTPAAMKDYLSSFDPHLKGLSGTREATDQIEKAYRVYAKKVPTKDADYTMDHTALVYLMDKSGRFVSPFNMKRKPEEAAADLKRYL GT:EXON 1|1-199:0| BL:SWS:NREP 1 BL:SWS:REP 42->196|SCO22_RICBR|3e-35|41.9|155/204| TM:NTM 1 TM:REGION 16->38| SEG 21->35|livglvvllwllggl| BL:PDB:NREP 1 BL:PDB:REP 44->199|2gqkA|2e-34|41.7|156/173| RP:PDB:NREP 1 RP:PDB:REP 47->199|2b7jA|3e-18|36.9|141/158| RP:PFM:NREP 1 RP:PFM:REP 44->179|PF02630|1e-41|53.7|136/164|SCO1-SenC| HM:PFM:NREP 1 HM:PFM:REP 41->184|PF02630|3.2e-48|43.8|144/174|SCO1-SenC| RP:SCP:NREP 1 RP:SCP:REP 46->197|1wp0A1|1e-23|42.1|152/160|c.47.1.10| HM:SCP:REP 40->199|2b7kA1|2e-49|43.1|160/0|c.47.1.10|1/1|Thioredoxin-like| OP:NHOMO 797 OP:NHOMOORG 530 OP:PATTERN ------------------111----------------------------------------------- ----1------------------------------------221------------------1----1111------------1121-----------------1-------------------------------22211---12-------------------------------------32211----2-------1------1---1111---21-2--1------211-------------------------------------------------------------------------------------------------------------------------------------------2--1221111112-1111111111211111111112-43334132211121131211111121111522111111222222222211-121111111111111112121222122211111-1221-222222222223333322224343322221112112223111131211111411211111111112231141-----------------1-1--------2---111-111111----------------11-121111112111121111112111111---12-1--------------------------------------------------------------------------------------------1-----1111111---------------------------1111112232122222322---------1111111111111112212122111-111111-331111----------------------------------------------11- 11--111-623-11111112111-111111111111-11111111111111111-1111111111111-1221112212211111111-11111-11111111221-121222132-1111131231324A2-223121212222122212212231133431111111-811111111J1111112131231132111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 164 STR:RPRED 82.4 SQ:SECSTR ###################################EEEccccGGGcccEEEETTccEEEGGGGTTccEEEEEEcTTccTHHHHHHHHHHHHHHHHHHHHcccEEEEEEccTTTccHHHHHHHGGGccTTcEEEEccHHHHHHHHHHTTcccTTcccTTccccccccccEEEEcTTccEEEEEcTTccTTHHHHHHHHHH DISOP:02AL 1-4| PSIPRED cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEcccccEEcHHHHcccEEEEEEEccccccccHHHHHHHHHHHHHHHHccccEEEEEEEEccccccHHHHHHHHHHHcccccEEEccHHHHHHHHHHcccHHccccccccccEEEEEEEEEEEccccEEEEEEcccccHHHHHHHHHHHc //