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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38240.1
DDBJ      :             Secretion protein HlyD
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  76/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.3.1d.41.2
:307 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   46->106 3bg5B PDBj 2e-05 20.0 %
:RPS:SCOP  65->124 1qpnA2  d.41.2.1 * 2e-04 22.0 %
:RPS:SCOP  97->299 1iu4A  d.3.1.8 * 1e-10 9.4 %
:HMM:PFM   208->256 PF04367 * DUF502 0.00018 26.5 49/108  
:HMM:PFM   85->126 PF00364 * Biotin_lipoyl 0.00062 36.6 41/74  
:BLT:SWISS 71->290 NCCB_ALCXX 2e-08 24.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38240.1 GT:GENE ABE38240.1 GT:PRODUCT Secretion protein HlyD GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(1132406..1133329) GB:FROM 1132406 GB:TO 1133329 GB:DIRECTION - GB:PRODUCT Secretion protein HlyD GB:PROTEIN_ID ABE38240.1 GB:DB_XREF GI:91681938 InterPro:IPR006143 LENGTH 307 SQ:AASEQ MSHDVATGHSRRLFRRGASLLALGAICATALPARAAEEANADAVKGQAVTVLKATKSCFPAIVEVSGFLIPRDEVSVRPDRPGAKVTDVTVDAGEIVAQGQTLARLAGPEGGSTTIQAPVAGLVSSSTAVIGAPASAKGDALFTIIARGEFDLVGQVPTRNLAQLATNQSAAVKIVGVPDEITGRVRRVSATVEPNSQLGNVFVGISSTKRLLSNASGRAMIKTGESCGISVPLTAVLYSSAGTVVQVVRRQTVETKRVEIGLMNGGNVEIREGLQEGDVVVARAGALLREGDTVRPVIAAAQSTEK GT:EXON 1|1-307:0| BL:SWS:NREP 1 BL:SWS:REP 71->290|NCCB_ALCXX|2e-08|24.2|211/397| SEG 28->43|atalparaaeeanada| SEG 244->260|tvvqvvrrqtvetkrve| RP:PDB:NREP 1 RP:PDB:REP 46->106|3bg5B|2e-05|20.0|60/1074| HM:PFM:NREP 2 HM:PFM:REP 208->256|PF04367|0.00018|26.5|49/108|DUF502| HM:PFM:REP 85->126|PF00364|0.00062|36.6|41/74|Biotin_lipoyl| RP:SCP:NREP 2 RP:SCP:REP 65->124|1qpnA2|2e-04|22.0|59/115|d.41.2.1| RP:SCP:REP 97->299|1iu4A|1e-10|9.4|202/331|d.3.1.8| OP:NHOMO 104 OP:NHOMOORG 76 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------2-1--------------------------------------------------------------------------------------------------------------------------------------------------------------2------------------------------------------------1111------222322-22223------------12422422----11121111111111-----11111-----------------11-------------------------------1111-----------------------------------111-11--1--111-11---1--------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------112--------------------------------11111--1--1-1-------------1--------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 60 STR:RPRED 19.5 SQ:SECSTR #############################################EEEEEEcccTTcEEcTTcEEEEEEccccEEEEEccccE#EEEEEcccTTcEEcTTcEEEEE######################################################################################################################################################################################################### DISOP:02AL 1-7,297-308| PSIPRED ccccccccHHHHHHHccHHHHHHHHHHHHccccHHHHHccHHHHHccEEEEEEEcccHHHHHHHHHcEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccEEEEEEEEccccEEcccccEEEEEEEccEEEEEEEEcHHHHHHcccccEEEEEEcccccEEEEEEEEEEccccccccEEEEEEEEccccccccccEEEEEEEEcccccEEEcHHHEEEccccEEEEEEEEcccEEEEEEEEEEEccEEEEEEccccccEEEcccHHHcccccEEEEEccccccccc //