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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38270.1
DDBJ      :             extracellular solute-binding protein, family 1
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  148/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:341 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   49->298 1poy1 PDBj 7e-12 28.8 %
:RPS:PDB   24->340 3d4gE PDBj 2e-26 15.6 %
:RPS:SCOP  27->340 1potA  c.94.1.1 * 4e-28 19.8 %
:HMM:SCOP  25->338 1potA_ c.94.1.1 * 2e-53 31.3 %
:RPS:PFM   102->269 PF01547 * SBP_bac_1 1e-06 34.4 %
:HMM:PFM   37->279 PF01547 * SBP_bac_1 9.6e-17 23.8 240/314  
:BLT:SWISS 49->298 POTD_SHIFL 2e-11 28.8 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38270.1 GT:GENE ABE38270.1 GT:PRODUCT extracellular solute-binding protein, family 1 GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1182373..1183398 GB:FROM 1182373 GB:TO 1183398 GB:DIRECTION + GB:PRODUCT extracellular solute-binding protein, family 1 GB:PROTEIN_ID ABE38270.1 GB:DB_XREF GI:91681968 InterPro:IPR006059 LENGTH 341 SQ:AASEQ MSRKIISGVVALAVVGTASALVAQPASITIVNPGGPYLEATLEAWGKTFTEKTNIKVKGDSPQSLPKIQQMVGAKNVSWDVVEVPPVFTMRHCGTLFEKLTPGLVDAARVNAGFGNECGVPDAGYANIMLYNKTKFAKGGPQNWADFFDVKKFPGKRGLWDGAEGVNLEIALLADGVAPENLYPLDLDRAFRKLSELKPHIVFWRTGAQSTQMMESGEVDMIMAWSSRAYPALKNGAPFEPVWNQHIIYNNVLAIPMGAPNKAASEAYIRHALEDKQQARITELYPVTPALIGAAPKLDEAGMKVFAGTPERAKTAIRLNLKWVADNSEVIQKRWIEWLNS GT:EXON 1|1-341:0| BL:SWS:NREP 1 BL:SWS:REP 49->298|POTD_SHIFL|2e-11|28.8|243/348| TM:NTM 1 TM:REGION 5->27| BL:PDB:NREP 1 BL:PDB:REP 49->298|1poy1|7e-12|28.8|243/323| RP:PDB:NREP 1 RP:PDB:REP 24->340|3d4gE|2e-26|15.6|314/472| RP:PFM:NREP 1 RP:PFM:REP 102->269|PF01547|1e-06|34.4|157/282|SBP_bac_1| HM:PFM:NREP 1 HM:PFM:REP 37->279|PF01547|9.6e-17|23.8|240/314|SBP_bac_1| GO:PFM:NREP 2 GO:PFM GO:0005215|"GO:transporter activity"|PF01547|IPR006059| GO:PFM GO:0006810|"GO:transport"|PF01547|IPR006059| RP:SCP:NREP 1 RP:SCP:REP 27->340|1potA|4e-28|19.8|303/322|c.94.1.1| HM:SCP:REP 25->338|1potA_|2e-53|31.3|307/322|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 257 OP:NHOMOORG 148 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------2--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11---------------------------------------------311---1-1--22222121121---2--2--26--32211131146522----17222321311111111-1111--1-----------------------------1------111-111112-111-3336221111114--1---111------12114-----------------------------------------------------------------------------------1-------------------------------1--------1-21--1---------------------------------22--1---------------------------11111111111-----------------1------------11-------------44442422333321222----------21121111112111------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 341 STR:RPRED 100.0 SQ:SECSTR cEEEEccccccccEEEEEccccTcTTEEEEEccTTccHHHHHHHHHHHHHHHHccEEEEEccTTHHHHHHHHHHTTccccEEEEEGGGHHHHHHTccccccccHHHHHHccHHHHHHTcEEEEEEccEEEEETTTcccccccccTTHHHHHHHHHHTTccccHHHHHHHHHHHTTcEEEEEETTEEHHHHHHHHHHHHHTccTTccHHHHHHHHHTTcEEEEEEcGGGHHHHHHHTccEETcccccEEEEEEEEEcTTcccHHHHHHHHHHTTccHHHHHHHHHHccccEEccHHHHHHHTTcHHHHHHHHHHHHcEccccTTHHHHHHHHHHHHHHHHHc DISOP:02AL 1-2| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHHccEEEEEEcccHHHHHHHHHccccccEEEEEccHHHHHHccccccccccccccHHHccHHHcccccccEEEEEEEEEEEHHHccccccccHHHHHccHHHcccEEEEcccccHHHHHHHHHccccHHHccHHHHHHHHHHHHHHccccEEEcccHHHHHHHHcccEEEEEEEcHHHHHHHHccccEEEEEcccEEEEEEEEEEcccccHHHHHHHHHHHccHHHHHHHHHccccccccccHHHHccHHHHHHccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHc //