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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38279.1
DDBJ      :             transcriptional regulator, MarR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  93/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:165 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   33->146 2fbiA PDBj 4e-08 23.7 %
:RPS:PDB   33->162 3bpxB PDBj 6e-16 16.9 %
:RPS:SCOP  33->160 2fbiA1  a.4.5.28 * 4e-23 25.0 %
:HMM:SCOP  27->163 1jgsA_ a.4.5.28 * 1.1e-28 29.4 %
:RPS:PFM   61->113 PF01047 * MarR 1e-05 34.0 %
:HMM:PFM   60->115 PF01047 * MarR 8.4e-16 32.1 56/59  
:HMM:PFM   95->160 PF12464 * Mac 7e-05 31.8 44/55  
:BLT:SWISS 31->161 HPCR_SHIFL 3e-10 26.0 %
:PROS 89->123|PS01117|HTH_MARR_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38279.1 GT:GENE ABE38279.1 GT:PRODUCT transcriptional regulator, MarR family GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(1193675..1194172) GB:FROM 1193675 GB:TO 1194172 GB:DIRECTION - GB:PRODUCT transcriptional regulator, MarR family GB:PROTEIN_ID ABE38279.1 GB:DB_XREF GI:91681977 InterPro:IPR000835 LENGTH 165 SQ:AASEQ MQQAQHPIHSNRTIKSQPVAKSPSRNPPITEHLAYLLAQANREINRQLEARLRDEGVPVEQWRILKVLSDGKGHSMGDLADEVLLNHPTLTKMIDRMVSDSLVYRVQDPDDRRKVLMYSSERGKALTQRLNALALSQEAHIAESYGDKATAELKRLLESLIDTAT GT:EXON 1|1-165:0| BL:SWS:NREP 1 BL:SWS:REP 31->161|HPCR_SHIFL|3e-10|26.0|131/148| PROS 89->123|PS01117|HTH_MARR_1|PDOC00861| BL:PDB:NREP 1 BL:PDB:REP 33->146|2fbiA|4e-08|23.7|114/136| RP:PDB:NREP 1 RP:PDB:REP 33->162|3bpxB|6e-16|16.9|130/138| RP:PFM:NREP 1 RP:PFM:REP 61->113|PF01047|1e-05|34.0|53/59|MarR| HM:PFM:NREP 2 HM:PFM:REP 60->115|PF01047|8.4e-16|32.1|56/59|MarR| HM:PFM:REP 95->160|PF12464|7e-05|31.8|44/55|Mac| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF01047|IPR000835| GO:PFM GO:0005622|"GO:intracellular"|PF01047|IPR000835| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF01047|IPR000835| RP:SCP:NREP 1 RP:SCP:REP 33->160|2fbiA1|4e-23|25.0|128/136|a.4.5.28| HM:SCP:REP 27->163|1jgsA_|1.1e-28|29.4|136/0|a.4.5.28|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 112 OP:NHOMOORG 93 OP:PATTERN -------------------------------------------------------------------- ----1--------------------1----------111----------------------------1--------------------111-------------------------------------------------------------------------------------------------------11111111-111-11----1-11-------------------------------------------------------------------------------------------------------------------------------------------11--12-----------1--111-------2122-----11-----------------------1-4--1---112-----21-1-------1-------------11---------------------------------4---111------11111-----1111-1---212-----1------11-3111------------------1----------------1231--11------------------------------------------------------1------1---1--1----------------------------------------------1-1----1-----------------1-------1--------------------------------------------------------------------------------------11------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 148 STR:RPRED 89.7 SQ:SECSTR #################cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTccHHHHHHHHHHHHcTTccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEEEETTEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHTTTccHHHHHHHHHHHHHHHHHHH DISOP:02AL 1-28,165-166| PSIPRED ccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEcccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcc //