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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38333.1
DDBJ      :             acyl-CoA dehydrogenase-like
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  66/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:408 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   47->169 2vigH PDBj 5e-06 27.5 %
:RPS:PDB   48->393 1egeA PDBj 2e-21 14.8 %
:RPS:SCOP  50->221 1rx0A2  e.6.1.1 * 1e-16 18.2 %
:RPS:SCOP  271->382 2c0uA1  a.29.3.1 * 8e-04 20.0 %
:HMM:SCOP  34->229 1jqiA2 e.6.1.1 * 1.9e-28 26.5 %
:HMM:SCOP  239->401 2c12A1 a.29.3.1 * 1.6e-11 23.3 %
:RPS:PFM   47->131 PF02771 * Acyl-CoA_dh_N 1e-05 31.8 %
:HMM:PFM   40->128 PF02771 * Acyl-CoA_dh_N 1.2e-14 26.1 88/113  
:HMM:PFM   257->394 PF00441 * Acyl-CoA_dh_1 1.7e-08 22.5 129/150  
:BLT:SWISS 47->399 ACDP_MYCTU 3e-08 26.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38333.1 GT:GENE ABE38333.1 GT:PRODUCT acyl-CoA dehydrogenase-like GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1243833..1245059 GB:FROM 1243833 GB:TO 1245059 GB:DIRECTION + GB:PRODUCT acyl-CoA dehydrogenase-like GB:PROTEIN_ID ABE38333.1 GB:DB_XREF GI:91682031 InterPro:IPR006092 LENGTH 408 SQ:AASEQ MAIVTDSSARDLTPAEAVPLRHDIVPLSQRVAQVAAIASADADSVDKESRFPRAALDAARQHGLLGAQIPVEFGGEGASIYDITEMCYALGRACASTAMIVAMHQTKVACLVRHGRGSAWHEQLMRRIAGEQMLLASSTTEGNNGGNIRASAAAIEVTAEGVSLVRNATVISYGAEADGVMTIARRASDASASDQVLVVFTKDDYTLTPTLGWETLGMRGTCSAGFELKANGVVGQVFAEPYDRIHAQTMTPVAHLSWSSAWAGIAAASVERAQAFIRKAARGAGGQMPPGAAHYNSAKMSLLKLRALISANLDAYAAHEYDDRGLGSLEFQSAINLLKVEASDLAVATAMSAMRACGLSGYRNDGDFTVGRHLRDVLSAPLMINNDRILANIATASLMSAVPSSLRD GT:EXON 1|1-408:0| BL:SWS:NREP 1 BL:SWS:REP 47->399|ACDP_MYCTU|3e-08|26.0|342/389| SEG 28->46|sqrvaqvaaiasadadsvd| SEG 184->194|arrasdasasd| SEG 257->269|swssawagiaaas| BL:PDB:NREP 1 BL:PDB:REP 47->169|2vigH|5e-06|27.5|120/374| RP:PDB:NREP 1 RP:PDB:REP 48->393|1egeA|2e-21|14.8|338/387| RP:PFM:NREP 1 RP:PFM:REP 47->131|PF02771|1e-05|31.8|85/113|Acyl-CoA_dh_N| HM:PFM:NREP 2 HM:PFM:REP 40->128|PF02771|1.2e-14|26.1|88/113|Acyl-CoA_dh_N| HM:PFM:REP 257->394|PF00441|1.7e-08|22.5|129/150|Acyl-CoA_dh_1| GO:PFM:NREP 2 GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02771|IPR006092| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02771|IPR006092| RP:SCP:NREP 2 RP:SCP:REP 50->221|1rx0A2|1e-16|18.2|170/231|e.6.1.1| RP:SCP:REP 271->382|2c0uA1|8e-04|20.0|110/170|a.29.3.1| HM:SCP:REP 34->229|1jqiA2|1.9e-28|26.5|196/231|e.6.1.1|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 239->401|2c12A1|1.6e-11|23.3|159/0|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 72 OP:NHOMOORG 66 OP:PATTERN -------------------------------------------------------------------- -------------------------------------111---------------1----11---------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-22------1-----------1--1-------21----1-11-----------1-111111-11---111111-311--1----------------------------------------------------------------------111111-1111111-1111111111121----------------------------------------------------------------------------------1--------1----------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 356 STR:RPRED 87.3 SQ:SECSTR ##############################################HcccccHHHHHHHHHHTcccTTccGGGTcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccEEEEcccTTccccGGGcccEEEEcccEEEEEEEEEEEETTTcccEEEEEEEccccTTccHHEEEEEETTcTTEEEEEEccccccTTccEEEEEEEEEEEEGGGccccTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcEETTEcEGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHcTcTTcHHHHHHHHHHGGGTccccHHHHHHHHHHHHHHTc###### DISOP:02AL 1-1,404-409| PSIPRED cEEEEcccHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccHHccccHHHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccEEEEEEcccccccccccccEEEEEEEcccEEEEcccEEEEccccccEEEEEEEEccccccccEEEEEEEcccccEEEcccccccccccccccEEEEccEEEHHHHcccccHHHHHHHccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccc //