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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38351.1
DDBJ      :             glycoside hydrolase, family 5
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  21/915 : Eukaryota  18/199 : Viruses  0/175   --->[See Alignment]
c.1.8
:440 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   35->418 1vrxA PDBj 4e-42 35.5 %
:RPS:PDB   33->419 1e5jA PDBj 4e-12 22.3 %
:RPS:SCOP  58->402 1gzjA  c.1.8.3 * 5e-09 17.6 %
:HMM:SCOP  32->442 1eceA_ c.1.8.3 * 2e-44 27.1 %
:RPS:PFM   85->270 PF00150 * Cellulase 3e-10 37.9 %
:HMM:PFM   44->380 PF00150 * Cellulase 1.1e-41 29.2 264/287  
:BLT:SWISS 36->418 GUN1_ACIC1 1e-40 35.3 %
:PROS 219->228|PS00659|GLYCOSYL_HYDROL_F5
:PROS 230->238|PS01070|NUCLEASE_NON_SPEC
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38351.1 GT:GENE ABE38351.1 GT:PRODUCT glycoside hydrolase, family 5 GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1266403..1267725 GB:FROM 1266403 GB:TO 1267725 GB:DIRECTION + GB:PRODUCT glycoside hydrolase, family 5 GB:PROTEIN_ID ABE38351.1 GB:DB_XREF GI:91682049 InterPro:IPR001547 InterPro:IPR001604 LENGTH 440 SQ:AASEQ MDAAVPSHVADPPAIVRDAGDLRPAGRGGYLLPNGYLSTSGSQIVDASGRPVRIASIGWNGTEGPLGAAPSGIWRVSYKTVLDSIVAAGFNAVRIPWTDIGLNAPLNGYSDRLGWINITLNPELLASSTPNSQGRYQYVTTLVAFQRIVDYAQEIGLKVIFNHHTNQGTAGQQRNGLWFDLGPGTDNTDGIVPGRVTAETFKQNWLLVARTFANNPTVIGYDLHNEPNGDRGHITWGGGGPTDIKAMCEDVGSAIQDVSPGVLIICEGPETYKPPPASSGMDPRHAAPAGNLTAAGANPVKLKIANKLVYSIHEYPDEISDTKRWGLPEVGKGFIDRMNFTWGYLVRDNIAPVWIGEMGASLRTPETREWARNLIDYMNGKYGQEGGPTFSGDQQPVSGSWWLIGPSNDPPFGLQTEWGVGNYRPDQIAITDEMLMRPRN GT:EXON 1|1-440:0| BL:SWS:NREP 1 BL:SWS:REP 36->418|GUN1_ACIC1|1e-40|35.3|323/562| PROS 219->228|PS00659|GLYCOSYL_HYDROL_F5|PDOC00565| PROS 230->238|PS01070|NUCLEASE_NON_SPEC|PDOC00821| SEG 286->299|aapagnltaaganp| BL:PDB:NREP 1 BL:PDB:REP 35->418|1vrxA|4e-42|35.5|324/358| RP:PDB:NREP 1 RP:PDB:REP 33->419|1e5jA|4e-12|22.3|283/302| RP:PFM:NREP 1 RP:PFM:REP 85->270|PF00150|3e-10|37.9|140/273|Cellulase| HM:PFM:NREP 1 HM:PFM:REP 44->380|PF00150|1.1e-41|29.2|264/287|Cellulase| GO:PFM:NREP 2 GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF00150|IPR001547| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF00150|IPR001547| RP:SCP:NREP 1 RP:SCP:REP 58->402|1gzjA|5e-09|17.6|267/304|c.1.8.3| HM:SCP:REP 32->442|1eceA_|2e-44|27.1|358/358|c.1.8.3|1/1|(Trans)glycosidases| OP:NHOMO 49 OP:NHOMOORG 41 OP:PATTERN ------------------------------------------------------1-1----------- ----2----------------1----------1-------1-------1211---------1--2-----1-------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1-----------2-------1-4--------------------1-------------------------11-------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----1---------1--------------------------------11-111111-11-1---------------------------------------------------------------------------------------------------------------------------1--------1211- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 406 STR:RPRED 92.3 SQ:SECSTR ################################HHcccEEETTEEEcTTccccccEEEEEccHTccTTcTHHHGGGccHHHHHHHHHHHcccEEEEEEEGGGTcccccTEccTTcTTTHGGcTTHHHHTTTEEEcccccEccHHHHHHHHHHHHHHTcEEEEEEEcTTccHHHHHHHHEEccccccGGGGcTTTcHHHHHHHHHHHHHHHHHHTTcTTEEEEEcccccccccTTccTTccccTTHHHHHHHHHHHHHHHcccccEEEccHHHHHTcHHHHHTccccccEEEEEEEcccHHHHTTTcTTEEEEEEEETTEcccHHHHHHHcGGGTccHHHHHHHHHHHHHTTccEEEEEEEcccTTcccHHHHHHHHHHHHHTTcEEEEEEEcccccTTccccTTccTTccccGGGccHHHEccccccccccccccEEcT## DISOP:02AL 1-6,439-441| PSIPRED cccccccccccccHHHHccccccccccccccccccEEEEEccEEEcccccEEEEEEEccccccccccccccccccccHHHHHHHHHHccccEEEEEccHHHccccccccccccccccccccHHHHcccccccccccccccHHHHHHHHHHHHHHcccEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHHHHHHccccccccccccccccccEEEEEcccccccccccccccccccccHHHHHHHHHHccccc //