Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38353.1
DDBJ : UDP-galactose 4-epimerase
Swiss-Prot:
Homologs Archaea 65/68 : Bacteria 800/915 : Eukaryota 184/199 : Viruses 2/175 --->[See Alignment]
c.2.1
:326 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB 3->326 2c20A PDBj 2e-76 43.2 %
:RPS:PDB 5->323 1e7rA PDBj 5e-42 16.2 %
:RPS:SCOP 5->321 1sb8A c.2.1.2 * 2e-52 24.7 %
:HMM:SCOP 1->326 1gy8A_ c.2.1.2 * 6.9e-81 32.9 %
:RPS:PFM 5->245 PF01370 * Epimerase 1e-28 41.4 %
:HMM:PFM 5->243 PF01370 * Epimerase 4.1e-52 32.9 225/238
:BLT:SWISS 5->325 EXOB_AZOBR 3e-91 51.7 %
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38353.1
GT:GENE ABE38353.1
GT:PRODUCT UDP-galactose 4-epimerase
GT:DATABASE GIB00345CH01
GT:ORG rpal2
GB:ACCESSION GIB00345CH01
GB:LOCATION complement(1268995..1269975)
GB:FROM 1268995
GB:TO 1269975
GB:DIRECTION -
GB:PRODUCT UDP-galactose 4-epimerase
GB:PROTEIN_ID ABE38353.1
GB:DB_XREF GI:91682051 InterPro:IPR001509 InterPro:IPR002225 InterPro:IPR003869 InterPro:IPR005886 InterPro:IPR005913 InterPro:IPR013120
LENGTH 326
SQ:AASEQ MDNYILVTGGAGYIGSHMTLALQAAGERPLVIDDLSAGLRSAVPDGVPLFAGSVGDAALVGDIMDRYPIAAIIHFAASVVVPESVARPLDYYRNNTANARTLIDCAVQRKVPHIVFSSTAAVYGEPDRTPISEGQSTQPINPYGRSKLMVEWMLDDVARAHPLSYAALRYFNVAGADPDGRAGQSSPNATHLIKIAVQAALGKRDGLDVYGTDYPTADGSCVRDYVHVSDLVAAHIDALRYLRAGNPSVICNIGYANGYSVLDVIEVVKRVSGVDFDVRIKGRRPGDPAALVASNELAKSLLGWRPRHDDLETIVRHALAWERRLP
GT:EXON 1|1-326:0|
BL:SWS:NREP 1
BL:SWS:REP 5->325|EXOB_AZOBR|3e-91|51.7|321/348|
BL:PDB:NREP 1
BL:PDB:REP 3->326|2c20A|2e-76|43.2|324/329|
RP:PDB:NREP 1
RP:PDB:REP 5->323|1e7rA|5e-42|16.2|303/314|
RP:PFM:NREP 1
RP:PFM:REP 5->245|PF01370|1e-28|41.4|222/232|Epimerase|
HM:PFM:NREP 1
HM:PFM:REP 5->243|PF01370|4.1e-52|32.9|225/238|Epimerase|
GO:PFM:NREP 3
GO:PFM GO:0003824|"GO:catalytic activity"|PF01370|IPR001509|
GO:PFM GO:0044237|"GO:cellular metabolic process"|PF01370|IPR001509|
GO:PFM GO:0050662|"GO:coenzyme binding"|PF01370|IPR001509|
RP:SCP:NREP 1
RP:SCP:REP 5->321|1sb8A|2e-52|24.7|299/341|c.2.1.2|
HM:SCP:REP 1->326|1gy8A_|6.9e-81|32.9|325/383|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains|
OP:NHOMO 3303
OP:NHOMOORG 1051
OP:PATTERN 112-1-21232224112312133243336542244223131212235555343133322331113-11 5883812322411114433-3111343333322232223526761421132334311211522164574631222222111263663344512211---31225335434--------------122322332432AAA8C-11937455444222242223225465562232322233333223111131354454546434654563455444473422242111111582111111111111113---141113212212341122232121211121122222233323123223-------------111332111132-625555565343413332224141-41132236364233211122213554336-----43A743435356A32223233314-544B386A382165549B59B8AA64222124877734-2222222232332A55-------------------------1-2-1243314873255554443333556633333433625211222171233322332324422235112212133457414335266575874673635474553453756233313324332322221221221132445342332132243322222223323113--15432------13543242223223232-2322233322222112212333323342222222222122221423222234-322222222222--2-333331111424322221122111121124222213223524344345223532243423332233331235111112313335334332333323--43333355--------1-1----------1-1---13-1-----1122311211363 --21213-421146611232342343411211111111111111113212455412112333311-11-1-11-111-1111122232-24312423232222335-4A2432333222-223352252EC4-443233-31332-221132-31323479847232234M23338456xA8634PJOK3N96866766 -----------------------1--------------------------------------------------------------------------------------------------------------------------------------------------1----
STR:NPRED 326
STR:RPRED 100.0
SQ:SECSTR HTTcEEEETTTcHHHHHHHHHHTTcTTEEEEcccTTTccTTcHHHHHHEEEccTTcHHHHHHHHHHcccEEEEcccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHTTccEEEEEccGGGccTTcccccccccccGGGHHHHHHHHHHHHHHHHHHHHHccEEEEEEEcEEEcTTccccTTcccHHHHHHHHHHHHHHHTccEcEEEEcccccEEcEEEHHHHHHHHHHHHHccHHHHHHTccTTcccEEEcccccEEHHHHHHHHHHHHTcccEEEEETTccccccccccccHHHHHHTTcccccccHHHHHHHHHHHHHHcT
DISOP:02AL 1-1|
PSIPRED cccEEEEEccccHHHHHHHHHHHHcccEEEEEEccccccHHHHHcccEEEEcccccHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccccHHHHHHHHHHHHHcccccEEEEccccccccccEEEccEEHHHHHHHHHHHHHcccccccccEEEEcccccEEHHHHHHHHHHHHcccccEEEcccccccccEEcccHHHHHHHHccccccccHHHHHHHHHHHHHHcc
//
[GTOP]
