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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38355.1
DDBJ      :             PDZ/DHR/GLGF
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  614/915 : Eukaryota  22/199 : Viruses  0/175   --->[See Alignment]
b.36.1b.47.1
:321 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   54->295 2zleA PDBj 2e-18 31.0 %
:RPS:PDB   54->207 3ee1A PDBj 1e-08 6.0 %
:RPS:PDB   225->305 3cs0A PDBj 8e-12 21.8 %
:RPS:SCOP  40->232 1mbmA  b.47.1.3 * 6e-11 12.7 %
:RPS:SCOP  235->305 1ky9B2  b.36.1.4 * 7e-09 25.0 %
:HMM:SCOP  15->222 1sotA2 b.47.1.1 * 1.9e-29 28.5 %
:HMM:SCOP  197->323 1uf1A_ b.36.1.1 * 2.9e-14 29.3 %
:HMM:PFM   238->273 PF00595 * PDZ 3e-07 38.9 36/81  
:BLT:SWISS 54->304 HTOA_HAEIN 2e-21 34.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38355.1 GT:GENE ABE38355.1 GT:PRODUCT PDZ/DHR/GLGF GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1271529..1272494 GB:FROM 1271529 GB:TO 1272494 GB:DIRECTION + GB:PRODUCT PDZ/DHR/GLGF GB:PROTEIN_ID ABE38355.1 GB:DB_XREF GI:91682053 InterPro:IPR001478 InterPro:IPR001940 LENGTH 321 SQ:AASEQ MPSLPEWNVPAAIRPRAADFPFDLERALSSVIGLHSIIPSDAFTANTLGTERAGNCVLIDDGLLLTIGYLITEAETVWLHLGDGRVVEGHALGFDAESGFGLVQALGPIDLPPLALGNSGAAKAGDRVVIAGAGGRTRSVAGRIATRQEFAGYWEYLLDDAIFTEPSHPNWGGAGLISATGELIGIGSLQIERSGTDAHYNMIVPIDLLKPALSDLRKFGRVDKPPRPWLGLYSTEIEGKIVVVGIAPKGPAARAELKSGDVILAVAGEKVSSEGEFYRKIWALGTAGVEVPLTLFSGGATFDVVLHSSDRAKFLKAPRLH GT:EXON 1|1-321:0| BL:SWS:NREP 1 BL:SWS:REP 54->304|HTOA_HAEIN|2e-21|34.2|243/466| BL:PDB:NREP 1 BL:PDB:REP 54->295|2zleA|2e-18|31.0|229/396| RP:PDB:NREP 2 RP:PDB:REP 54->207|3ee1A|1e-08|6.0|134/336| RP:PDB:REP 225->305|3cs0A|8e-12|21.8|78/379| HM:PFM:NREP 1 HM:PFM:REP 238->273|PF00595|3e-07|38.9|36/81|PDZ| RP:SCP:NREP 2 RP:SCP:REP 40->232|1mbmA|6e-11|12.7|189/198|b.47.1.3| RP:SCP:REP 235->305|1ky9B2|7e-09|25.0|68/83|b.36.1.4| HM:SCP:REP 15->222|1sotA2|1.9e-29|28.5|207/213|b.47.1.1|1/1|Trypsin-like serine proteases| HM:SCP:REP 197->323|1uf1A_|2.9e-14|29.3|123/128|b.36.1.1|1/1|PDZ domain-like| OP:NHOMO 1244 OP:NHOMOORG 644 OP:PATTERN --1-------------11111-------------------------------------------1--1 123--------11---111-1-1111-----11111-1111------1----111-----11----1---------------1-12-1111111111----11-2121---------111----111111111111----2111122225332112223232212314332222111122112-----21--13222222222222222113332222122-111------1-1---------------------------------------11------------------------------------------------11-3-1111111-1---11-111-1------1111-2---12221-1--2222233212111535678435533422222222222-55555554353132214554442421-3321233331232222222212224232-----11111------------------1-1----22221333433333333332333333443323321333332313343322332322221111111223353-1111111222112-231232222331252221----------1111111111--1-111212122121-22222122222222222121-1122311-11122332112222222222-2222222222222222223222332212322222222222222322222222133333333333311211111111113332211122222221122221212222222222222222222222222----------1112222222222222222222222222--21--1111--------21--------------------------11111-1---121 --------------------------------------------------------------------------------------------------------------2------1---1--11---------------------------2---111---------------2111-----12121-23--11--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 289 STR:RPRED 90.0 SQ:SECSTR #######################HccHHHHHHHHHHccccccccccEEEEEcccccccHHHHHHHHHHHHHTTcHHHHHHHHHTTcTTTTcccHHHHHHHHHHHEEEEHHHHHHTHHHccccccEEEEEEEEccEEEEEEEEccEEEccccEEEEEEEEEEHcEEEEcccTTcTTEEcccccHHHHHHHccEETGGGcEEEEEEEEccccccccEEEEEEccccHcccccccEccTTTccEEEcccccccTTGGGTccTTcEEccccccccccHHHHHHHHHHHHTcccccEEEEEETTEEEEHHccccccc######### DISOP:02AL 8-22,39-53,312-322| PSIPRED ccccccccccccccccccHHHHHHHHHcccEEEEEEEEccccccccccccccccEEEEEcccEEEEEHHHcccccEEEEEEccccEEEEEEEEEcccccEEEEEEEccccccEEEEccHHHcccccEEEEEEcccccEEEEEEEEEccccccccccEEEEEEEEccccccccccEEEccccEEEEEEEEEEEccccccccEEEEEHHHHHHHHHHHcccccEEcccEEEEEEEEEEEccEEEEEEEccccHHHHcccccccEEEEEccEEcccHHHHHHHHHHHcccccEEEEEEEEccEEEEEEEEEcccHHHHHHHccc //