[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38359.1
DDBJ      :             ABC transporter related
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  904/915 : Eukaryota  186/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:539 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   38->248 2it1B PDBj 5e-25 31.7 %
:BLT:PDB   422->505 1gajA PDBj 3e-06 27.4 %
:RPS:PDB   37->505 3cmvG PDBj 6e-37 8.3 %
:RPS:PDB   477->519 2ccjA PDBj 2e-04 9.3 %
:RPS:SCOP  37->248 1b0uA  c.37.1.12 * 1e-34 25.9 %
:RPS:SCOP  280->505 1b0uA  c.37.1.12 * 5e-12 12.2 %
:HMM:SCOP  37->243 1ii8.1 c.37.1.12 * 1.2e-56 41.0 %
:HMM:SCOP  260->513 1pf4A1 c.37.1.12 * 1.2e-34 26.0 %
:RPS:PFM   72->193 PF00005 * ABC_tran 3e-15 39.0 %
:RPS:PFM   428->455 PF00005 * ABC_tran 6e-04 35.7 %
:HMM:PFM   72->193 PF00005 * ABC_tran 3.6e-23 31.6 117/118  
:HMM:PFM   324->451 PF00005 * ABC_tran 3.3e-05 24.3 111/118  
:HMM:PFM   43->84 PF01078 * Mg_chelatase 0.00019 38.1 42/207  
:BLT:SWISS 36->526 YUFO_BACSU 2e-72 33.8 %
:PROS 165->179|PS00211|ABC_TRANSPORTER_1
:PROS 428->442|PS00211|ABC_TRANSPORTER_1
:REPEAT 2|138->276|404->533
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38359.1 GT:GENE ABE38359.1 GT:PRODUCT ABC transporter related GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(1275681..1277300) GB:FROM 1275681 GB:TO 1277300 GB:DIRECTION - GB:PRODUCT ABC transporter related GB:PROTEIN_ID ABE38359.1 GB:DB_XREF GI:91682057 InterPro:IPR001687 InterPro:IPR003439 InterPro:IPR003593 LENGTH 539 SQ:AASEQ MEERSAQLNYTSSSQDRPSDASAAAPPERPPLFQGLGLTKRYGDFTANSAIDIAIAPGQIHALLGENGAGKSTLVKTICGLIQPDDGAMRWRGAPFAPAGPADAQACGIGLVSQHFALFDNLTVAENVALGQRGGESLDILSRRLAQIAERYGLPLDPKREVWRLSVGERQRIEIVRALMQDPQFLILDEPTAVLTPAEADRLFDVLEQLRADGRALLYISHKLEEVKRLCDTATILRAGRVVAACNPRAETAASLARMMVGVDVIPPKPQPGHSIGAPRLVVNGLSLAPDDPHGVTLKQIDLQLRGGEIVGIAGVAGNGQDELFAALSGEAPLDEARTILIDGQAAGDLSITARRRFGAAFIPEQRLGHATVPTMRLSENALLTSHADPGVVRRGFVDRAALLGLVDRVTAAFGVRKAQRDPEAERLSGGNLQKFIVGREILRQPKLLVVNQPSWGLDAGAAAAIRQALIDLAAGGAAVLVISQDLDELLEIADSIAVMYHGRLSPPLAAAETGREQLGLLMGGSGWPQQSVHDAIPA GT:EXON 1|1-539:0| BL:SWS:NREP 1 BL:SWS:REP 36->526|YUFO_BACSU|2e-72|33.8|488/510| PROS 165->179|PS00211|ABC_TRANSPORTER_1|PDOC00185| PROS 428->442|PS00211|ABC_TRANSPORTER_1|PDOC00185| NREPEAT 1 REPEAT 2|138->276|404->533| SEG 12->31|sssqdrpsdasaaapperpp| SEG 93->108|gapfapagpadaqacg| SEG 307->320|ggeivgiagvagng| SEG 457->475|gldagaaaairqalidlaa| BL:PDB:NREP 2 BL:PDB:REP 38->248|2it1B|5e-25|31.7|205/361| BL:PDB:REP 422->505|1gajA|3e-06|27.4|84/253| RP:PDB:NREP 2 RP:PDB:REP 37->505|3cmvG|6e-37|8.3|446/1167| RP:PDB:REP 477->519|2ccjA|2e-04|9.3|37/196| RP:PFM:NREP 2 RP:PFM:REP 72->193|PF00005|3e-15|39.0|118/123|ABC_tran| RP:PFM:REP 428->455|PF00005|6e-04|35.7|28/123|ABC_tran| HM:PFM:NREP 3 HM:PFM:REP 72->193|PF00005|3.6e-23|31.6|117/118|ABC_tran| HM:PFM:REP 324->451|PF00005|3.3e-05|24.3|111/118|ABC_tran| HM:PFM:REP 43->84|PF01078|0.00019|38.1|42/207|Mg_chelatase| GO:PFM:NREP 4 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 2 RP:SCP:REP 37->248|1b0uA|1e-34|25.9|212/258|c.37.1.12| RP:SCP:REP 280->505|1b0uA|5e-12|12.2|223/258|c.37.1.12| HM:SCP:REP 37->243|1ii8.1|1.2e-56|41.0|205/370|c.37.1.12|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 260->513|1pf4A1|1.2e-34|26.0|242/244|c.37.1.12|2/2|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 38525 OP:NHOMOORG 1158 OP:PATTERN MMC7CGB9KLJHJGPDaBNJHHKVsKObbRbSD7BAA7EDFB7NUHVdDNxiT7HPHMPGKAEAQ157 OTqO*WWUddeNSLSPMLL-Ld88W*LLLLLLijglv***T*X*l*fblhXM*tqLQZAAtx*a*ju***dOOOOpURSLxVg76968MLLI4LBD9--CBNEHFRHUMO55555556684444AOLDLRJGOMQKhhhtwGGFuZeddrUSfXdQRGGICHEaWUfrusV9GDEA88HBFB8dYbQMZT4QXlxxyuyw**p**zxw**pttnm***Vip*semhghcfc**QUVWVWTTUUUUUUTOOLOPnOTQjjPMTJTjiKLqtSOJRZSaYVbZcebVfekjjljieeinfjhPPRQOQQRTRRPQlZZRQQddebg*kx********b*adtuuVYZV*fbcX*YbRI**dZUWaUNYXOXdJLOXFbURRMEIFCFbQ***ROm****************-jp*id*l***L7**************HGL**********MLMMMMMMvVZFNgX*33333333322354554433435555464JFAECC***********vxy*u********i*******yBM*yq*lvkp******WlhGOCHWSHGHHHFGPNMYkiSs*LTRnaPciUSfGWXUPOUcLRXaXYhvStCDBKDDDDFED668898A888JBBHKJfemHmPUHMEmOQSSRLNYSOPRPRZQTUX5-9FTQN11----*p**Uvkknnmlolpjj-mkjknjnljjnpkghjhgk*****VZQebccddededcbdbcc*cZYfgfhL2w***********23FH9A9AAKJKKOHtk*RQRWRTDEIEFMMOVIKLJKBOCGLmWrrnrr***q**uyk***9AA8A9A9AEYbZieffffjlkjiQQOKKKKLNMBABA23KLIIFFDF78766566nBN87967-6565885GFB756684222PbbGEZmVeaBXI ----JHB-KB46CKB76856AC7D5D9AA5646CAD597858845676AC76F899A466563--2111-11-31-1--112221232-6B465554432447DB719PQPIMIaPOFAB6DMJge8h9**T3THcGFB5U9ESK8FA9ARB8*DOKIkCT*BWCP5MHJyLRHFD6D3*353A9TOV*5dT98WQRPD ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-27,528-540| PSIPRED cccccccccccccccccccccccccccccccEEEEEEEEEEcccEEEEcccEEEEccccEEEEEccccccHHHHHHHHHccccccccEEEEEcccccccccccccccEEEEEcccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccccHHHccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHccEEEEEEccEEEEEEcHHHccHHHHHHHHHHHHHcccccccccccccccEEccccEEccccccccEEEEEEEEEEccEEEEEEEcccccHHHHHHHHHcccccccccEEEEccEEcccccHHHHHHcccEEEEcccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccccccccccHHHccccHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHccEEEEEEccEEEEEEcHHHccHHHHHHHHccccccHHHHHccccc //