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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38390.1
DDBJ      :             extracellular solute-binding protein, family 5
Swiss-Prot:             

Homologs  Archaea  28/68 : Bacteria  562/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:538 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   87->488 1dppA PDBj 2e-33 30.6 %
:RPS:PDB   30->537 3drjA PDBj 4e-75 20.3 %
:RPS:SCOP  36->538 1xocA1  c.94.1.1 * 2e-80 23.0 %
:HMM:SCOP  28->539 1jetA_ c.94.1.1 * 6.3e-110 31.1 %
:RPS:PFM   87->450 PF00496 * SBP_bac_5 4e-42 35.1 %
:HMM:PFM   83->450 PF00496 * SBP_bac_5 2.5e-79 33.5 358/372  
:BLT:SWISS 41->116 SARA_STRGC 4e-06 31.6 %
:BLT:SWISS 87->488 DPPA_ECOLI 5e-33 30.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38390.1 GT:GENE ABE38390.1 GT:PRODUCT extracellular solute-binding protein, family 5 GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(1309995..1311611) GB:FROM 1309995 GB:TO 1311611 GB:DIRECTION - GB:PRODUCT extracellular solute-binding protein, family 5 GB:PROTEIN_ID ABE38390.1 GB:DB_XREF GI:91682088 InterPro:IPR000914 LENGTH 538 SQ:AASEQ MALSRFEINRRTVLLTSAAIAANVLNPMRAFAQETPRKGGVFNVHYGAEQRQLNPSLQASTGVYIIGGKIQEPLVDLDAAGNPVGVLAESWESTPDGKTITFKLRKGVVWHDGKPFTSEDVAFTALNMWKKILNYGSTLQLFLTAVDTPDPQTAIFRYERPMPLNLLLRALPDLGYVSPKHIYETGDIRQNPVNLAPIGTGPFKFNKYERGQYIIADRNDNYWRPNAPYLDRIVWRVITDRAAAAAQLEAGSLHLSPFSGLTISDMARLGKDKRFIVSTKGNEGNARTNTLEFNFRRKELSDIRVRQAIAHAINVPFFIENFLGDFARLGTGPIPSTSADFYPGPNTPQYAYDKKKAIALLDEAGLKPAGGGTRLSLRLLPAPWGEDISLWATFIQQSLSEIGVQVEIVRNDGGGFLKQVYDEHAFDLATGWHQYRNDPAVSTTVWYRSGQPKGAPWTNQWGWEDATTDKIIDNAATEVDPVKRKALYADFVTRANTELPIWMPIEQLFVTVISAKARNHSNNPRWASSTWHDLWLAE GT:EXON 1|1-538:0| BL:SWS:NREP 2 BL:SWS:REP 41->116|SARA_STRGC|4e-06|31.6|76/663| BL:SWS:REP 87->488|DPPA_ECOLI|5e-33|30.6|385/535| SEG 161->174|pmplnlllralpdl| SEG 242->246|aaaaa| BL:PDB:NREP 1 BL:PDB:REP 87->488|1dppA|2e-33|30.6|385/507| RP:PDB:NREP 1 RP:PDB:REP 30->537|3drjA|4e-75|20.3|502/560| RP:PFM:NREP 1 RP:PFM:REP 87->450|PF00496|4e-42|35.1|353/366|SBP_bac_5| HM:PFM:NREP 1 HM:PFM:REP 83->450|PF00496|2.5e-79|33.5|358/372|SBP_bac_5| GO:PFM:NREP 2 GO:PFM GO:0005215|"GO:transporter activity"|PF00496|IPR000914| GO:PFM GO:0006810|"GO:transport"|PF00496|IPR000914| RP:SCP:NREP 1 RP:SCP:REP 36->538|1xocA1|2e-80|23.0|491/504|c.94.1.1| HM:SCP:REP 28->539|1jetA_|6.3e-110|31.1|495/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 2060 OP:NHOMOORG 594 OP:PATTERN --1-2-----------1-1111--1111--11-1---------1-2-33-HB6-21211--1--1--- 11--3111222-1--------1---4------11111836-428653-123131221---12-1236-341-111311-11-311111-------------------------------------2222222223243364---4A12211121111------22112242------------8341143-3125565635625463359933315542138722111111L6-111111111111111-----------------------1------111-------------------------------2---------183112222232-211222-111122418---188621--41-133-16331-----1---131EGP112843A15657678476F-1171161DFB1-VHHHCC6HFFEGD4---2469798-47---------1112126-------------------------------1---BC99755555533333444633332343C4146--223--3-131848F11--21131----------11-113--1242232221111111211----151111-1-1111111-111111112-11--561--1111111111111111111111111---11-1------56C92575554544445-5555544555545455553898A92123323333333333333644444452-122222222222---1----------1234555-22222215233------2-112165656A6C479873BBC----------23224344322344--1--------------4111111--------1---------------------------213-13931411- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----5---------------------1--1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 519 STR:RPRED 96.5 SQ:SECSTR ###################HHHHHHTTTTcccccccccccEEEEEEEcccccccccccHHHHHHTGGGTTTTcccEEcTTccEEccccEEEEEETTTTEEEEEEcTTcccTTcccccHHHHHHHHHHHHcGHHHTcccccTTEEcTTcTTccEEEEEcccccGGGGcTTccccccccccHHHHTTccGGGTTGTTcccccccEEEEEEETTTEEEEEEcTTccccccccccEEEEEEEcHHHHHHHHHHTTcccEEEEEccccTTHHHHHTcTTEEEEEEcccEEETTTTEEEcccccGGGcHHHHHHHHHHccHHHHHHHHcTTcEEEccccccTTcGGGccTTccccccccHHHHHHHHHHTTcEEcTTTEEcEEEEEcccccTTHHHHHHHHHHHHHHTTcEEEEGGGccccHHHHHHHHHHcTTccccccEEEEEEEcccccccHHHHcTTcTTcTTccccHHHHHHHHTcGGGGcHHHHHHHHHHHHHHHHHHccEEEcEEEEEEEEEETTEEcccccTcTcccHHHHcEEcc DISOP:02AL 1-8,31-36| PSIPRED cccccccccHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEccccccccccEEcccHHHHHHHHHHHHHEEEcccccEEEEEEEEEEEcccccEEEEEEccccEEcccccccHHHHHHHHHHHHcccccHHHHHHHHHccEEEccccEEEEEEcccccHHHHHHHccccccccHHHHHHccccccccccccccccccEEEEEEEcccEEEEEEcccccccccccEEEEEEEEEccHHHHHHHHHcccEEEEEcccccHHHHHHHHccccEEEEEccccccEEEEEEEEcccccccccHHHHHHHHHHHcHHHHHHHHHccccEEEcccccccccccccccccccccccHHHHHHHHHHcccccccccEEEEEEEEccccccHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHcccccEEEEEcccccccHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccEEEEEEccEEEEEcccEEEEEEccccccccHHHEEccc //