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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38418.1
DDBJ      :             PAS/PAC sensor signal transduction histidine kinase
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  525/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
a.30.2d.110.3d.122.1f.55.1
:451 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   210->432 3d36A PDBj 5e-13 29.7 %
:RPS:PDB   59->109 2d01A PDBj 3e-06 17.6 %
:RPS:PDB   94->438 2bu8A PDBj 2e-23 12.5 %
:RPS:SCOP  27->199 2axtC1  f.55.1.1 * 6e-11 8.2 %
:RPS:SCOP  191->252 2c2aA1  a.30.2.1 * 2e-06 16.7 %
:RPS:SCOP  329->432 1gjvA2  d.122.1.4 * 1e-18 27.0 %
:HMM:SCOP  76->188 1dp6A_ d.110.3.2 * 5e-15 36.9 %
:HMM:SCOP  187->304 2c2aA1 a.30.2.1 * 1.3e-06 25.8 %
:HMM:SCOP  298->448 1gkzA2 d.122.1.4 * 1e-40 35.8 %
:RPS:PFM   67->127 PF00989 * PAS 2e-07 42.6 %
:RPS:PFM   346->438 PF02518 * HATPase_c 5e-13 41.8 %
:HMM:PFM   343->448 PF02518 * HATPase_c 1.6e-27 38.5 104/111  
:HMM:PFM   207->297 PF00512 * HisKA 1.8e-17 38.1 63/68  
:HMM:PFM   72->178 PF08448 * PAS_4 7.9e-11 28.0 107/110  
:BLT:SWISS 54->436 FIXL_BRAJA 7e-23 32.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38418.1 GT:GENE ABE38418.1 GT:PRODUCT PAS/PAC sensor signal transduction histidine kinase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1338661..1340016 GB:FROM 1338661 GB:TO 1340016 GB:DIRECTION + GB:PRODUCT PAS/PAC sensor signal transduction histidine kinase GB:PROTEIN_ID ABE38418.1 GB:DB_XREF GI:91682116 InterPro:IPR000014 InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR005467 LENGTH 451 SQ:AASEQ MRSDRGDRGESLIDRVGSPLPSPFEGDQEAAWIEVIRKMDEVYADLLRYETDLEEKNTALEEAQAFISSVIESVSDILIVCDRNGIILQVNPAAMRLLGASADALVEHPLGELVDPSDRARIEDLLRAHSPSDLIALEVRFVTARGLSDLYAINGATRADQAARRVGTVLTGRPIGELRRAYEALHTAHSELQRAQRQLVEQEKMASLGRLVAGVAHELNNPISFIYGNIHTLQRYRERMAAYLQAIHCGADPAEVEALRRELKIDALLADYASLIEGTLEGAMRVSEVVKNLRRLSFPKSGEIQRVDVDRVVRTAARWAARAKPGHVELTFNMAADVAIIGNEGQFHQIVVNLVDNAIDAVRGQSEPRIDISARRQGCDVVIAVADNGPGLADGLIDKIFEPFFTTKPVGEGTGLGLWISYGIAREHGGTLAASNRPGGGAAFTLTLAAG GT:EXON 1|1-451:0| BL:SWS:NREP 1 BL:SWS:REP 54->436|FIXL_BRAJA|7e-23|32.9|337/505| SEG 306->323|rvdvdrvvrtaarwaara| SEG 439->450|gggaaftltlaa| BL:PDB:NREP 1 BL:PDB:REP 210->432|3d36A|5e-13|29.7|185/217| RP:PDB:NREP 2 RP:PDB:REP 59->109|2d01A|3e-06|17.6|51/124| RP:PDB:REP 94->438|2bu8A|2e-23|12.5|311/359| RP:PFM:NREP 2 RP:PFM:REP 67->127|PF00989|2e-07|42.6|61/112|PAS| RP:PFM:REP 346->438|PF02518|5e-13|41.8|91/112|HATPase_c| HM:PFM:NREP 3 HM:PFM:REP 343->448|PF02518|1.6e-27|38.5|104/111|HATPase_c| HM:PFM:REP 207->297|PF00512|1.8e-17|38.1|63/68|HisKA| HM:PFM:REP 72->178|PF08448|7.9e-11|28.0|107/110|PAS_4| GO:PFM:NREP 2 GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00989|IPR013767| GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 3 RP:SCP:REP 27->199|2axtC1|6e-11|8.2|171/447|f.55.1.1| RP:SCP:REP 191->252|2c2aA1|2e-06|16.7|60/89|a.30.2.1| RP:SCP:REP 329->432|1gjvA2|1e-18|27.0|100/165|d.122.1.4| HM:SCP:REP 76->188|1dp6A_|5e-15|36.9|111/0|d.110.3.2|1/1|PYP-like sensor domain (PAS domain)| HM:SCP:REP 187->304|2c2aA1|1.3e-06|25.8|89/0|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 298->448|1gkzA2|1e-40|35.8|151/193|d.122.1.4|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 3574 OP:NHOMOORG 537 OP:PATTERN ------------------------1----1-----------1-15-------1--------------5 DTP-3----------------1---1------41111211-4241-------1---------1-311-22----------1-11-2126633-7------1212244411---------------45124-39EH1744AA6258-716711-2111--1-1--1-3der8------------331-----722222234343434542343354444364-1-1------CE---------------------1---------------------------------------------------------------------64-5-----------111-----23----134437A54--22---11--G67B55D2222287TMKA64JIEIG22221222225-TKULIKaV4991BDD78A49D7A9EE15346A45443763343344334425J7A--------11---------------1111-24C4122213AAACB83889776BC9998578BA6684--66556634653A2235D123-62-------1119BG7*bIACQK2SdSQR-lRsUHLU5JOOKPcQBT9-3111111-----------79124--4327476251376545454344466435B4--14825------52--11-4556465634-53435663545653444465451----2112222222222222-44332341--1111111-111---------1111-3A-6--------------1-------12-42AAAA8CCB3CACDIFGG---------21--48878835355326A6AA345------9-CC6899-------11----------------------------1-1112111-L- --------------------------------------------------------------------------------------------------------------1------------------------------------------------------1-------------------1--4-----2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 428 STR:RPRED 94.9 SQ:SECSTR ##########GccHHHHHHcccEHHTTccccHHccccccTTTccccHHHHccccTHHHTTGGGcccccccEEcTTcEEEEEcTTccEEEccHHHHHHHHHTTcccccccHHHHHHcccHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHTcHHHTcHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccTTcTTTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccccccccccTTcEEEEEHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccEEEEEEEcccTTcccEEEEcHHHHHHHHHHHHHHHHHHTTccccccEEEEEEEcccEEEEEEEEEEEcccHHHHGGGGcTTTTccccccccccHHHHHHHHHHHTTcEEEEEEET############# DISOP:02AL 1-6,55-63,279-280| PSIPRED cccccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccEEEEcHHHHHHHcccHHHHccccHHHHccHHHHHHHHHHHHHHccccccEEEEEEEcccccEEEEEEEEEEEEcccccEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccHHHHHHHHHHHHHHHHccccEEEEEcccccEEEEEHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEccEEEEEEEEccccccHHHHHHHccccEEEcccccccccHHHHHHHHHHHcccEEEEEEEcccccEEEEEEccc //