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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38444.1
DDBJ      :             Radical SAM
Swiss-Prot:             

Homologs  Archaea  43/68 : Bacteria  275/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.1.28d.350.1
:393 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   71->248 3cl4A PDBj 1e-06 10.4 %
:RPS:PDB   231->393 2dqxA PDBj 2e-22 12.8 %
:RPS:SCOP  105->219 2h7aA1  d.350.1.1 * 4e-07 8.8 %
:HMM:SCOP  61->321 1r30A_ c.1.28.1 * 1.4e-09 18.9 %
:HMM:PFM   106->285 PF04055 * Radical_SAM 1.2e-19 21.1 161/166  
:HMM:PFM   287->335 PF00970 * FAD_binding_6 0.0004 26.5 49/99  
:BLT:SWISS 102->325 Y2609_MYCBO 1e-29 31.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38444.1 GT:GENE ABE38444.1 GT:PRODUCT Radical SAM GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1363937..1365118 GB:FROM 1363937 GB:TO 1365118 GB:DIRECTION + GB:PRODUCT Radical SAM GB:PROTEIN_ID ABE38444.1 GB:DB_XREF GI:91682142 InterPro:IPR002787 InterPro:IPR006638 InterPro:IPR007197 LENGTH 393 SQ:AASEQ MTRYLRGMSRASNALKRPPVKAPSEPVGAISPFPAIEVAIDKQRRRGRGAQSNDSGRFEAEARVAFDDGWQSLDELPPFKTTVALDTARKVITRNESPDIGFDRSINPYRGCEHGCVYCFARPTHAFLGLSPGLDFESRLFAKPDAPALLEKELAAADYEPRMIAIGTNTDPYQPIERERKIMRGILEVLEKTGHPVGIVTKSALVTRDIDILARMAKRQLAKVALSVTSLDPKLARSMEPRASSPANRLEALKRLSDAGIPTTVMVAPVIPALNDIEIERILDAAAHAGVKEASYVMLRLPLEVRDLFREWLMANYPDRYRHVFTMIRDMRGGRDYDSQWGTRMKGTGPIAWMIGRRFETACARLGLNKRRSKLTTDHFAKPERAGQQLSLF GT:EXON 1|1-393:0| BL:SWS:NREP 1 BL:SWS:REP 102->325|Y2609_MYCBO|1e-29|31.7|224/340| SEG 144->158|pdapallekelaaad| RP:PDB:NREP 2 RP:PDB:REP 71->248|3cl4A|1e-06|10.4|163/358| RP:PDB:REP 231->393|2dqxA|2e-22|12.8|148/491| HM:PFM:NREP 2 HM:PFM:REP 106->285|PF04055|1.2e-19|21.1|161/166|Radical_SAM| HM:PFM:REP 287->335|PF00970|0.0004|26.5|49/99|FAD_binding_6| RP:SCP:NREP 1 RP:SCP:REP 105->219|2h7aA1|4e-07|8.8|102/109|d.350.1.1| HM:SCP:REP 61->321|1r30A_|1.4e-09|18.9|238/312|c.1.28.1|1/1|Radical SAM enzymes| OP:NHOMO 358 OP:NHOMOORG 318 OP:PATTERN 222122111111121221322333---2----11--1--------1--1-111-231222211-4--- 111-1---------11111-11--111111111111111111-1-11--1-1111-11---1----1111----------1-1--------1-------1---11111-1--------------------------11111---1-------------------1-----------------------1112------------------1----------1----------1----------------------------------------------------1----------------------------------------111-11111-2-12------1-----11-111--1----2---1---1--1111-----111111111111111111111111-11111111111-11111111111111111-111111-11--------111-1-1-------------------------------1111-111111111111111111111111111111121--111111111-1-1---1-1-1-----------1-11-------1-2-------------111-111-----------------------------112---------------------------------1---------------------------------------------------------------------------------------------1-111----11111--------------------------111211111111111111------------------------1111111111-------1----11--------2----------------------------1---11111121 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 333 STR:RPRED 84.7 SQ:SECSTR ##########################################################TcTTcHHHHHHcccGGGGcccTTcccHHHHHHHHHHHHccEEEEEEEEEEEcccccccTTcTTTcTTccccccccccHHHHHHHH##HHHHHHHHHHHHHTTccEEEEEEcccGGGTTHHHHHHHHHHHTcHHTTTHTTccEEEEEcccccHHHHHHHHHTTccEEEcccccTTccGGGccGGGTccHHHHHHHHHHHHHTTccEEEEEEcccccccHHHHHHHHHHHcTTcccTTccccccccEEEEccccHHHHHccHHHHHHHHHHHHHHTTTccccccGGGGTcccccccccTGGcccccHHHHTTTccTTcGGGGccccccccccccccc DISOP:02AL 1-3,5-8,11-31,377-379,383-384,387-387,389-389| PSIPRED ccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccEEEEEEccHHHHcccccccccccEEccccccccccEEEEcccccHHHcccccccccEEEEEccccHHHHHHHHHHccccccEEEEEcccccccccHHHcccHHHHHHHHHHcccEEEEEEccccHHccHHHHHHHHHccccEEEEEEEcccHHHHHHHccccccHHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccHHHcccccccccccccc //