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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38448.1
DDBJ      :             phage SPO1 DNA polymerase-related protein
Swiss-Prot:             

Homologs  Archaea  50/68 : Bacteria  398/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.18.1
:282 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   93->277 1ui0A PDBj 2e-41 44.2 %
:RPS:PDB   106->279 2d07A PDBj 4e-36 12.1 %
:RPS:SCOP  92->271 1l9gA  c.18.1.2 * 4e-42 37.3 %
:HMM:SCOP  87->277 1l9gA_ c.18.1.2 * 6.4e-59 44.1 %
:RPS:PFM   121->225 PF03167 * UDG 6e-09 31.4 %
:HMM:PFM   120->268 PF03167 * UDG 3.7e-40 40.4 141/150  
:BLT:SWISS 59->134 GLMM_STRS7 3e-04 34.7 %
:BLT:SWISS 121->272 DPOL_BPSP1 2e-12 29.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38448.1 GT:GENE ABE38448.1 GT:PRODUCT phage SPO1 DNA polymerase-related protein GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(1368142..1368990) GB:FROM 1368142 GB:TO 1368990 GB:DIRECTION - GB:PRODUCT phage SPO1 DNA polymerase-related protein GB:PROTEIN_ID ABE38448.1 GB:DB_XREF GI:91682146 InterPro:IPR005122 InterPro:IPR005273 LENGTH 282 SQ:AASEQ MTPEPAPSLQQLLAFYLEAGVDCALNDEPINRLLDDAIAVPIQAETSEAAPRPDTEKIRSLAPRPRAQPAGAIPPLPEAAIVSAREAAATAPSLDALRALMEQFDGCALRSTATRLVFADGNPKASIMLVGEAPGREEDIEGLPFVGRSGKLLDLMLAAIGLDRSKVYIANVIPWRPPGNRTPTPQETQICLPFIRRQIELVDPAILVTLGNPSTQALLSTRDGIMRTRGRWFDYHNGARTIRALPTLHPAYLLRQPTYKRLAWQDLRAIATAFAALESPVN GT:EXON 1|1-282:0| BL:SWS:NREP 2 BL:SWS:REP 59->134|GLMM_STRS7|3e-04|34.7|72/450| BL:SWS:REP 121->272|DPOL_BPSP1|2e-12|29.3|147/924| SEG 79->91|aaivsareaaata| BL:PDB:NREP 1 BL:PDB:REP 93->277|1ui0A|2e-41|44.2|181/192| RP:PDB:NREP 1 RP:PDB:REP 106->279|2d07A|4e-36|12.1|173/215| RP:PFM:NREP 1 RP:PFM:REP 121->225|PF03167|6e-09|31.4|105/147|UDG| HM:PFM:NREP 1 HM:PFM:REP 120->268|PF03167|3.7e-40|40.4|141/150|UDG| RP:SCP:NREP 1 RP:SCP:REP 92->271|1l9gA|4e-42|37.3|177/191|c.18.1.2| HM:SCP:REP 87->277|1l9gA_|6.4e-59|44.1|188/191|c.18.1.2|1/1|Uracil-DNA glycosylase-like| OP:NHOMO 594 OP:NHOMOORG 449 OP:PATTERN 11111111111111111111111121111111--------------1-11111-11111112--1111 12211----------11--------1-----112121-11211-1-----------------1--1--1---------1111211111--------------------1----------------11-1111111111122111111-11---1111111111--111111111111111111-1111111---1111111111111111-----111-----------------------------------11-----1111--11-------------------------------------------------------1--2-2222222-2-3-222----22--1---2111111111111111--112122211111212221222121211111111112-22222122321112223323432231111122222221122222222122321211111111111111111111111111111111-112111122221222111122332222111232221--11111------11-11121-111-------112221-11111----------1-111111332322121-1-----------------1-21121---------------------------------2111--------------------------------------------------------------------------------------------------11112------------------------------------------------------------------------1-12122111------11--1111--------11--------------------------1111111111122 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------6------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 188 STR:RPRED 66.7 SQ:SECSTR ###########################################################################################HHHHHHHHHTTTTccccccccccEEccccccTTccEEEEEccccHHHHHHTcccccccccHHHHHHHHTTcccccccGGGGGGHHHEEcccccHHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHHHHHTcccccccccEEEEETTcccEEEEEccccTTccccGGTHHHHHHHHHHHHHHHTccc### DISOP:02AL 1-4,34-72,278-283| PSIPRED cccccHHHHHHHHHHHHHHccHHHHcccccHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHcccccccccccccccccccccccEEEEEccccccccccccccccHHHHHHHHHHHHccccHHHEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHccccEEEEEcHHHHHHHHcccccccEEEEEEEEEccccccEEEEEEccHHHHHccHHHHHHHHHHHHHHHHHHHHHccccc //