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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38475.1
DDBJ      :             DNA-3-methyladenine glycosylase I
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  559/915 : Eukaryota  9/199 : Viruses  0/175   --->[See Alignment]
a.96.1
:217 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->192 2ofkB PDBj 3e-57 50.0 %
:RPS:PDB   23->102 2dclB PDBj 4e-23 18.9 %
:RPS:SCOP  11->195 1lmzA  a.96.1.4 * 7e-72 49.7 %
:HMM:SCOP  11->197 1lmzA_ a.96.1.4 * 3.5e-79 58.8 %
:RPS:PFM   16->189 PF03352 * Adenine_glyco 9e-65 62.6 %
:HMM:PFM   16->193 PF03352 * Adenine_glyco 7.4e-82 56.2 178/179  
:BLT:SWISS 11->192 3MG1_ECOLI 2e-55 50.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38475.1 GT:GENE ABE38475.1 GT:PRODUCT DNA-3-methyladenine glycosylase I GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(1401768..1402421) GB:FROM 1401768 GB:TO 1402421 GB:DIRECTION - GB:PRODUCT DNA-3-methyladenine glycosylase I GB:PROTEIN_ID ABE38475.1 GB:DB_XREF GI:91682173 InterPro:IPR004597 InterPro:IPR005019 LENGTH 217 SQ:AASEQ MTAARLHDDGLTRCPWPGDDPLYVAYHDNEWGVPEYDDRALFEKLILDGFQAGLSWITILRKRNNFRRAFDDFDPAKIARYDAAKIQELMNDVGIVRNRAKIEGAIGSAKAWLKIQEEGPGFSKLLWDFVGGAPKVNAFKTTAGVPASTPLSVKISKELSAHGFKFVGPTIVYAFMQAVGMVNDHLVSCHCHARCGAMQRPARRSAAPARQTATRQR GT:EXON 1|1-217:0| BL:SWS:NREP 1 BL:SWS:REP 11->192|3MG1_ECOLI|2e-55|50.5|182/187| SEG 197->216|amqrparrsaaparqtatrq| BL:PDB:NREP 1 BL:PDB:REP 11->192|2ofkB|3e-57|50.0|182/183| RP:PDB:NREP 1 RP:PDB:REP 23->102|2dclB|4e-23|18.9|74/98| RP:PFM:NREP 1 RP:PFM:REP 16->189|PF03352|9e-65|62.6|174/179|Adenine_glyco| HM:PFM:NREP 1 HM:PFM:REP 16->193|PF03352|7.4e-82|56.2|178/179|Adenine_glyco| GO:PFM:NREP 2 GO:PFM GO:0006284|"GO:base-excision repair"|PF03352|IPR005019| GO:PFM GO:0008725|"GO:DNA-3-methyladenine glycosylase I activity"|PF03352|IPR005019| RP:SCP:NREP 1 RP:SCP:REP 11->195|1lmzA|7e-72|49.7|185/187|a.96.1.4| HM:SCP:REP 11->197|1lmzA_|3.5e-79|58.8|187/187|a.96.1.4|1/1|DNA-glycosylase| OP:NHOMO 630 OP:NHOMOORG 571 OP:PATTERN ---------------------------------1---------------1-----------------1 --1-111222211111111-11111111111111111111111111-2-111111111--111-1121111-----11--11------1111-1--1--1-11111-1-1--------------1---------------------1-------------------------------------------11-----------------11----------11-11111111-11111111111111111111212-22-111123112221211111-11111111111111111111111111111111112112111111--1-1---1-11---1----------1-1----11--------111------111111111111111111111111111111-111-11111111111-11121111111111111111111111111111111-----111--------------------------------1--111121111112111111121111111111111--111-11111-1-1-11--1-11-1111111----11-2111-11-11111-1-11-11-11111--1--211--------1--------1-----1111111111-1111111111111111111------1------1111111111111-111-1111111111111111111111111111111111111111111111111111-111111111111---111111111111212111111-1111---11111111---11111111121111111111----1----111111111111111111211111-------1----11----------1----1-------------1-----------------11 ----11------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------256D-73------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 182 STR:RPRED 83.9 SQ:SECSTR ##########ccccTHHHHHHHEEETTcEETTEEccccccHHHHHHHHHHHTTccccEEEEccccccccccccEEEEEEEEEHHHHHHHHHccEEEEEEEEEHHHHHHHHHHHHHHHTTccHHHHHHHTTTTccEEcccccGGGcccccHHHHHHHHHHHHTTcccccHHHHHHHHHHTTcEEcccTTcTTc######################### DISOP:02AL 1-4,6-6,199-218| PSIPRED ccccccccccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHcccccccccccccHHHcccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccHHccccccHHHHHHccHHHHHccHHHHHHHHcc //