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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38492.1
DDBJ      :             ABC-type branched-chain amino acid transport systems, periplasmic component
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  138/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.93.1
:427 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   53->426 3i09A PDBj 4e-89 51.5 %
:RPS:PDB   50->401 3eafA PDBj 1e-25 11.3 %
:RPS:SCOP  52->409 1peaA  c.93.1.1 * 1e-34 19.1 %
:HMM:SCOP  52->426 1qo0A_ c.93.1.1 * 4.5e-87 31.8 %
:RPS:PFM   76->271 PF01094 * ANF_receptor 9e-20 33.0 %
:HMM:PFM   19->44 PF06403 * Lamprin 1.1e-05 57.7 26/138  
:BLT:SWISS 54->274 LIVB6_BRUME 1e-13 27.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38492.1 GT:GENE ABE38492.1 GT:PRODUCT ABC-type branched-chain amino acid transport systems, periplasmic component GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1416245..1417528 GB:FROM 1416245 GB:TO 1417528 GB:DIRECTION + GB:PRODUCT ABC-type branched-chain amino acid transport systems, periplasmic component GB:PROTEIN_ID ABE38492.1 GB:DB_XREF GI:91682190 LENGTH 427 SQ:AASEQ MMGTYRMAVIGRLTTVALWAGLGVASLGVTSLGVAGLGIGGAAAQQSADTSPVRIGVLTDMSGLFADISGHGAVIAVKMAVDDFGGKVLGRPIEVLSADHQNKADVGLSLARAWIDEKNVVMLADLMNSSVALGVMELTRNKDRIAIVNGASTSVITNEKCTPNSIHYTWDTYALARGTANAVVNRGKKKWALLEADFAYGHQLANDSRRFVEAAGGAVVSEIKHPINTSDFSSFLLQAQSSGADVIALANGGADTINSIKSAAEFGIGRGGKQQVVGLAINLNDTKALGLDAAQGLLLTEAFYWDRNDETRAWSKRFLEKFGKMPTSTQAGDYSSTMHYLKAVAAAGTLDAQTVMAKMRDTPVDDFFAKGGKIRIDGRMVHDMYLAEVKKPSESKGPWDFYNILATIPGDQAFRPLSESACPLVKK GT:EXON 1|1-427:0| BL:SWS:NREP 1 BL:SWS:REP 54->274|LIVB6_BRUME|1e-13|27.3|216/390| TM:NTM 1 TM:REGION 16->38| SEG 31->48|slgvaglgiggaaaqqsa| SEG 288->299|algldaaqglll| BL:PDB:NREP 1 BL:PDB:REP 53->426|3i09A|4e-89|51.5|357/361| RP:PDB:NREP 1 RP:PDB:REP 50->401|3eafA|1e-25|11.3|344/379| RP:PFM:NREP 1 RP:PFM:REP 76->271|PF01094|9e-20|33.0|194/319|ANF_receptor| HM:PFM:NREP 1 HM:PFM:REP 19->44|PF06403|1.1e-05|57.7|26/138|Lamprin| RP:SCP:NREP 1 RP:SCP:REP 52->409|1peaA|1e-34|19.1|351/368|c.93.1.1| HM:SCP:REP 52->426|1qo0A_|4.5e-87|31.8|365/0|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 471 OP:NHOMOORG 143 OP:PATTERN ------------------------3---------------------------------------1--- ------------------------------------------------------------111--------------------------------------------------------------------------11-----14--------1----------------------------11-------------------------------------------------------------------------------------------------------------------------------------------1--1-----------------------1----11-----------------------------KHG213B6DD522222212213-12H1-O19----5111234333217B---3151211211--------4----3-1-----------------------------------364271222311111111441111121274C651144252434787538-------------------422-3----------------------112----1-------------------------------1----------------------------------------------------------------------------------------------------------------------------------------111--------------------------------1-1-111-2---------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------2----2------------------------2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 377 STR:RPRED 88.3 SQ:SECSTR #################################################cEEEEEEEEEccccTTHHHcHHHHHHHHHHHHHHHEEcTTccEEEEEEEEcTTcHHHHHHHHHHHHHTTcccEEEEcccHHHHHHHHHHHHHHTcEEEEccccGGGTTcTTEEcccccHccHHHHHHHHHHHHHHHccEEEEEEEcTTcHHHHTTHHHHHHHTGGGTEEEEEEEEccTTcHHHHHHHHHHHTTcccEEEEcccHHHHHHHHHHHHHHTcccTccEEEEcGGGccTTHHHHHcGGGTTcEEEEEccccGGcTTcHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHTTccHHTHHHHHHHHHHcccccTTcccccccccccccccEEEEEEcTTccEEEEEEcEEEEEEEcHHHHcccTTTcccTTcc# DISOP:02AL 1-5,7-7| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHcccccccEEEEEEEccccccccccHHHHHHHHHHHHHHHccccccEEEEEEEEEccccHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHcccEEEEEccccccccccccccEEEEEccccHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHHHHHHcccEEEEEEEcccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHccccccccEEEEEccccHHHHHHHcccccccEEEEccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccccEEEEEccccccccEEEEEEEccccccccccEEEEEEEccHHHccccHHHcccHHccc //