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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38502.1
DDBJ      :             acyl-CoA dehydrogenase-like
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  533/915 : Eukaryota  165/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:404 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->404 1siqA PDBj e-152 67.9 %
:RPS:PDB   14->390 3d6bD PDBj 6e-89 64.6 %
:RPS:SCOP  16->250 1siqA2  e.6.1.1 * 1e-81 63.8 %
:RPS:SCOP  252->404 1siqA1  a.29.3.1 * 2e-32 74.5 %
:HMM:SCOP  14->262 1w07A3 e.6.1.2 * 3.6e-76 43.8 %
:HMM:SCOP  250->401 1r2jA1 a.29.3.1 * 1.9e-39 34.2 %
:RPS:PFM   30->141 PF02771 * Acyl-CoA_dh_N 8e-18 33.9 %
:RPS:PFM   146->195 PF02770 * Acyl-CoA_dh_M 6e-13 56.0 %
:RPS:PFM   251->397 PF00441 * Acyl-CoA_dh_1 9e-20 33.3 %
:HMM:PFM   29->141 PF02771 * Acyl-CoA_dh_N 1.5e-33 43.4 113/113  
:HMM:PFM   255->397 PF00441 * Acyl-CoA_dh_1 2.9e-30 28.0 143/150  
:HMM:PFM   145->195 PF02770 * Acyl-CoA_dh_M 6.2e-23 47.1 51/52  
:BLT:SWISS 10->403 GCDH_BOVIN e-153 68.0 %
:PROS 147->159|PS00072|ACYL_COA_DH_1
:PROS 356->375|PS00073|ACYL_COA_DH_2

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38502.1 GT:GENE ABE38502.1 GT:PRODUCT acyl-CoA dehydrogenase-like GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1424347..1425561 GB:FROM 1424347 GB:TO 1425561 GB:DIRECTION + GB:PRODUCT acyl-CoA dehydrogenase-like GB:PROTEIN_ID ABE38502.1 GB:DB_XREF GI:91682200 InterPro:IPR006089 InterPro:IPR006090 InterPro:IPR006091 InterPro:IPR006092 InterPro:IPR013107 LENGTH 404 SQ:AASEQ MSVRAQTKDKPAPASFKWDDPLLLEDQLTEDERMIRDTARAYAQDKLLPRVSQAYLEEKTDREIFNEMGSLGLIGVTLPEDYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYPIYAYGDETQRKKYLPKLASGEWVGCFGLTEPDAGSDPGGMKTKAEKVADGYRLSGSKMWISNAPIADVFVVWAKSAAHDNQIRGFILEKGMKGLSAPKIGGKLSLRASITGEIVMDGVVVPEEALLPNVSGLKGPFGCLNRARYGISWGVMGAAEDCMQRARQYTLDRKQFNRPLAATQLVQKKLADMQTEIALGVQASLRVGRLMDEGKVAPEMISIVKRNNCGKALDIARVARDMHGGNGIQIEYHVMRHAQNLETVNTYEGTHDVHALILGRAITGIQAFS GT:EXON 1|1-404:0| BL:SWS:NREP 1 BL:SWS:REP 10->403|GCDH_BOVIN|e-153|68.0|391/438| PROS 147->159|PS00072|ACYL_COA_DH_1|PDOC00070| PROS 356->375|PS00073|ACYL_COA_DH_2|PDOC00070| BL:PDB:NREP 1 BL:PDB:REP 16->404|1siqA|e-152|67.9|386/390| RP:PDB:NREP 1 RP:PDB:REP 14->390|3d6bD|6e-89|64.6|367/372| RP:PFM:NREP 3 RP:PFM:REP 30->141|PF02771|8e-18|33.9|112/113|Acyl-CoA_dh_N| RP:PFM:REP 146->195|PF02770|6e-13|56.0|50/53|Acyl-CoA_dh_M| RP:PFM:REP 251->397|PF00441|9e-20|33.3|147/150|Acyl-CoA_dh_1| HM:PFM:NREP 3 HM:PFM:REP 29->141|PF02771|1.5e-33|43.4|113/113|Acyl-CoA_dh_N| HM:PFM:REP 255->397|PF00441|2.9e-30|28.0|143/150|Acyl-CoA_dh_1| HM:PFM:REP 145->195|PF02770|6.2e-23|47.1|51/52|Acyl-CoA_dh_M| GO:PFM:NREP 6 GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02771|IPR006092| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02771|IPR006092| GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02770|IPR006091| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02770|IPR006091| GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090| RP:SCP:NREP 2 RP:SCP:REP 16->250|1siqA2|1e-81|63.8|232/236|e.6.1.1| RP:SCP:REP 252->404|1siqA1|2e-32|74.5|153/154|a.29.3.1| HM:SCP:REP 14->262|1w07A3|3.6e-76|43.8|249/0|e.6.1.2|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 250->401|1r2jA1|1.9e-39|34.2|152/153|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 6088 OP:NHOMOORG 728 OP:PATTERN 44----6888A88977-243432D96661-7B-----------------------------4661--- 4556N3-5111736RnXJJ-Jc33YdJJJJJOcbkbSg**4T7W1133-11-667668--FDS1EDOIHLD--------152B-----11111122---41545564555--------------------------66588---9311-1------------------13-------------67767--1A735555545555555553455545557BAAA11------53-111111-11111111---1---------------------------------------------------------------------111315444444444423222221-6-3-4-13-981596-17---11-3-71-JIIP-----21ULP543QGPMKAA9A9AA7978-44B44D4BAAT-6553646667678EAOAABD7777D9H11111111B----886-----------------------------1LJTJ18RICMA9BGMB9588899IDABBB6BP8VPjdY35FDAB5CFFOGHHKZ229---156-------1-1E763ZDC-----------765-B-5--7787BA66---------------------------43-7E375E9166555699665695A7668---121-------2-4-1-12223233222-2222222212222222221-------13241333332313113-1121111-----------------6222226666-JD33---------------HHHDHCD89991LMMO8JDFICCCCC747111111111-1114-----351225555555555------12CC98AA----------1-------------------------1--11-1------ ----558-941-998BBA8A999A78CBB69697689988799ABA977778AC896767774--------------------------6A6B7764555787BB9-A44GCUABEE88869B8FA5I8Q*C-EAN6975D79D939867A73E9CBAL7AC7IBD877BCDGBF2223O31243454C83344E9989 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 393 STR:RPRED 97.3 SQ:SECSTR ###########HHccccTTcTTcHHHHccHHHHHHHHHHHHHHHHHTHHHHHHHHHHTcccTHHHHHHHHTTcccTTccGGGTcccccHHHHHHHHHHHHTTcHHHHHHHHHHHHTTHHHHHHHccHHHHHHHHHHHHTTcccEEEEccccccccEGGGcccEEEEETTEEEEEEEEEEEETGGGccEEEEEEEEEccccEEEEEEEETTcTTEEccEEccccccTTccEEEEEEEEEEEEGGGccTTcccTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEETTEEGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccTHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccHHHHHHHHHHHccccHHHcccHHcccccc DISOP:02AL 1-17| PSIPRED cccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccEEEEEEcccccccccHHHcEEEEEEEccEEEEEEEEEEEEccccccEEEEEEEcccccccEEEEEEEcccccEEEEcccccccccccccEEEEEccEEccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccc //