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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38537.1
DDBJ      :             Polynucleotide adenylyltransferase region
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  695/915 : Eukaryota  69/199 : Viruses  0/175   --->[See Alignment]
a.173.1d.218.1
:417 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   30->290 1ou5A PDBj 3e-32 37.0 %
:RPS:PDB   41->337 3bjdC PDBj 3e-25 14.9 %
:RPS:SCOP  20->150 1ou5A2  d.218.1.4 * 1e-32 40.3 %
:RPS:SCOP  152->400 1mivA1  a.173.1.1 * 1e-17 20.0 %
:HMM:SCOP  1->150 1ou5A2 d.218.1.4 * 9.6e-38 40.7 %
:HMM:SCOP  151->415 1miwA1 a.173.1.1 * 2.6e-41 24.9 %
:RPS:PFM   33->153 PF01743 * PolyA_pol 3e-12 47.8 %
:HMM:PFM   32->153 PF01743 * PolyA_pol 4.2e-27 36.1 122/126  
:BLT:SWISS 30->407 TRNT1_MOUSE 3e-40 31.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38537.1 GT:GENE ABE38537.1 GT:PRODUCT Polynucleotide adenylyltransferase region GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1464260..1465513 GB:FROM 1464260 GB:TO 1465513 GB:DIRECTION + GB:PRODUCT Polynucleotide adenylyltransferase region GB:PROTEIN_ID ABE38537.1 GB:DB_XREF GI:91682235 InterPro:IPR002646 LENGTH 417 SQ:AASEQ MTAAVRADAPWLHVGPAAQVLALLDGHGEEARVVGGAVRNALLKLPIGDVDIATTALPEEVVRRARAAGIKAVPTGIEHGTVTLVLDGHGFEITTLREDVETFGRKAKVAFGRDWVRDAQRRDFTINGLSVSADGVVHDHVGGLADIAARRVRFIGDPDQRIAEDYLRILRFFRIHAAYGVGAPERDGYLACIRGRGGLSTLSAERMRMEMLKLMVAGGAAESVVAMADGGLLLGVLGGVIYPGAFAAMVEAERALGLDADPVRRLGALAVAVTEDAKRLTQRLRLSNAESKRLDSMGHRWWRLARMDEATARRRLYRLGEPRFHDRMMLAWARAGREADPAPWRDLIALPQRWRAPAFPLKAADFIARGFAEGPALGHVLTLAEDAWLAADFPVDDQRLQAIADQTAARFARDHRL GT:EXON 1|1-417:0| BL:SWS:NREP 1 BL:SWS:REP 30->407|TRNT1_MOUSE|3e-40|31.6|370/434| SEG 230->240|gglllgvlggv| BL:PDB:NREP 1 BL:PDB:REP 30->290|1ou5A|3e-32|37.0|243/344| RP:PDB:NREP 1 RP:PDB:REP 41->337|3bjdC|3e-25|14.9|275/320| RP:PFM:NREP 1 RP:PFM:REP 33->153|PF01743|3e-12|47.8|115/123|PolyA_pol| HM:PFM:NREP 1 HM:PFM:REP 32->153|PF01743|4.2e-27|36.1|122/126|PolyA_pol| GO:PFM:NREP 3 GO:PFM GO:0003723|"GO:RNA binding"|PF01743|IPR002646| GO:PFM GO:0006396|"GO:RNA processing"|PF01743|IPR002646| GO:PFM GO:0016779|"GO:nucleotidyltransferase activity"|PF01743|IPR002646| RP:SCP:NREP 2 RP:SCP:REP 20->150|1ou5A2|1e-32|40.3|119/140|d.218.1.4| RP:SCP:REP 152->400|1mivA1|1e-17|20.0|240/265|a.173.1.1| HM:SCP:REP 1->150|1ou5A2|9.6e-38|40.7|150/152|d.218.1.4|1/1|Nucleotidyltransferase| HM:SCP:REP 151->415|1miwA1|2.6e-41|24.9|261/265|a.173.1.1|1/1|Poly A polymerase C-terminal region-like| OP:NHOMO 827 OP:NHOMOORG 764 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-111111111111111111111111111111111211111111111111111111111111111-----1111-------11---------222222222222222--------------------1------------------------------------------1--1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1-111111111111111-1111111-111-1221--1------11-111-1111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111122222-------1111--11111111--11111111111111111----11211111111111111111112-1-1-1-------------1-1122222211-----------111111111-1---1111111111111-11111-1---11-11111--11111------1-1-1111111111111-1111111111111111111111-1-111111111111111111111111111-111111111111--11111111111111111111111111111-11-111111---111111111111111111---------2-11121221211112211111111111111-12211111111-1111211111-------------------------------1-1 ------1-2-------------------------------------------------------------------------------------1------------1--1121122111111152111451-1111111211111111-1111111-12111111-11131111----2--------2-1---1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 369 STR:RPRED 88.5 SQ:SECSTR ################HHHHHHHHHHTTccEEEEcTTTHHHHHTcccHHHHHHTTccHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHccGGGHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcGGcGcHHHHHTTTcccHHHHHHHHHcTTTTTccHHHHHHTTHHHHHHHHHHHcccHHHHHHHHHHHHHTTTTcGGGcHHHHHHHHHHHTTccccTTccc#####TTcGGGGTcHHHHHHHHHHHHHHHcccTHHHHHHHHHHTcccHHHHHHHHHHTTccTTTTHHHHTTcccccGGGcTTHHHHHTTTTcHHHHHHHHHHHHHHHHccccEEcTTccEEEEEccE###EEEEccccTTcEEE###########cccccccc##TTTccccccEEE########### DISOP:02AL 1-7,417-418| PSIPRED ccEEccccccccccHHHHHHHHHHHHcccEEEEEcHHHHHHHcccccccEEEEEcccHHHHHHHHHHHccccccccccccEEEEEEccEEEEEEEEccccccccccccccccccHHHHHHHHHccccEEEEcccccEEccccHHHHHHcccEEccccHHHHHHHcHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHHHHHccccccHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccHHHHHHccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccc //