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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38554.1
DDBJ      :             protein of unknown function DUF1194
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  39/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.62.1
:281 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   88->241 1ck4A PDBj 3e-06 9.9 %
:RPS:SCOP  53->241 1jeqA4  c.62.1.3 * 2e-06 10.3 %
:HMM:SCOP  41->245 1qc5A_ c.62.1.1 * 8.3e-18 25.3 %
:RPS:PFM   53->247 PF06707 * DUF1194 3e-52 52.4 %
:HMM:PFM   42->248 PF06707 * DUF1194 6.6e-85 55.2 203/206  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38554.1 GT:GENE ABE38554.1 GT:PRODUCT protein of unknown function DUF1194 GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1478872..1479717 GB:FROM 1478872 GB:TO 1479717 GB:DIRECTION + GB:PRODUCT protein of unknown function DUF1194 GB:PROTEIN_ID ABE38554.1 GB:DB_XREF GI:91682252 InterPro:IPR002035 InterPro:IPR010607 LENGTH 281 SQ:AASEQ MRWWVSIGAVVAAVSAAGMVGGLAAPNRAAPIADRNDDAMAVDVELVLAVDVSYSMDVDELAVQREGYAEALRSSDFMKTLKTGPNGRIAVTYFEWAAASDQKIILPWQLIDGPESADAVATEIMNAPLRRASRTSISGAINFAMPLFEQNAYHGLRRVIDISGDGPNNNGEPVTLARDAAVEKGVVINGLPIMVKEPSYSTMDIENLDYYYEDCVIGGPGSFVVTIKSRDKFKEAIRTKLVMEVAGRTPPHRIVPVADRAQTPRVSCLVGEKIWQDRWGR GT:EXON 1|1-281:0| TM:NTM 2 TM:REGION 4->26| TM:REGION 37->59| SEG 8->25|gavvaavsaagmvgglaa| SEG 37->52|ddamavdvelvlavdv| RP:PDB:NREP 1 RP:PDB:REP 88->241|1ck4A|3e-06|9.9|151/192| RP:PFM:NREP 1 RP:PFM:REP 53->247|PF06707|3e-52|52.4|191/205|DUF1194| HM:PFM:NREP 1 HM:PFM:REP 42->248|PF06707|6.6e-85|55.2|203/206|DUF1194| RP:SCP:NREP 1 RP:SCP:REP 53->241|1jeqA4|2e-06|10.3|175/212|c.62.1.3| HM:SCP:REP 41->245|1qc5A_|8.3e-18|25.3|186/0|c.62.1.1|1/1|vWA-like| OP:NHOMO 49 OP:NHOMOORG 39 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------211---11111------------111111-113--1---1121111-11--241--1112-2------------1-1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 189 STR:RPRED 67.3 SQ:SECSTR ####################################################cTTccHHHHHHHHHHHHHHHHTcccHTTccccTTcTTccEEEEEEEcccEEEEEcTTTcccHHcHHHHHHHHHTccccccccccHHHHHHHHHHTTGGTccTTccEEEEEEEccccTTGGGHHHHHHHHHHTTEEEEEEEEcHHHHHTTcccHHHHHHHHTccccHHHHEEEEccGGGGGcHHHHHHHH######################################## DISOP:02AL 281-282| PSIPRED cEEEEEHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEEEEEEEEEcccccHHHHHHHHHHHHHHHccHHHHHHHHHccccEEEEEEEEEcccccccEEEcEEEEccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccEEEEEEEccccccccccHHHHHHHHHcccEEEEEEEEEccccccccccccHHHHHHHccccccccEEEEEEccHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHcc //