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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38555.1
DDBJ      :             Carotenoid oxygenase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  121/915 : Eukaryota  94/199 : Viruses  0/175   --->[See Alignment]
d.92.1
:467 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->463 2biwA PDBj 6e-46 33.6 %
:RPS:PDB   13->464 2biwA PDBj e-124 30.9 %
:RPS:SCOP  266->351 3btaA3  d.92.1.7 * 9e-10 19.3 %
:RPS:PFM   12->466 PF03055 * RPE65 3e-78 43.7 %
:HMM:PFM   13->465 PF03055 * RPE65 1.1e-146 42.4 453/484  
:BLT:SWISS 13->464 CCD_CROSA 4e-54 34.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38555.1 GT:GENE ABE38555.1 GT:PRODUCT Carotenoid oxygenase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(1479825..1481228) GB:FROM 1479825 GB:TO 1481228 GB:DIRECTION - GB:PRODUCT Carotenoid oxygenase GB:PROTEIN_ID ABE38555.1 GB:DB_XREF GI:91682253 InterPro:IPR004294 LENGTH 467 SQ:AASEQ MLQVTGIPDACDNLAPIPMECDAPSLPIKGELPRELNGTLYRNGANPQFASPNAHWFFGDGMLHAFRLENGRASYRNRWVRTPKWLAEHAAGRPLYGEFNLKLPDAPRSAPDDGNVANTNIVFHAGRLLALEEAHLPIEIERDTLATRGYCDYGGALKGPFTAHPKIDPVTGEMLFFGYNAAGPLKRTMSFGAIDASGHVTRFEYFKAPYAAMVHDFIVTENYVLFPILPLTGSIWRAMRGRPPYAWDPGKGSYVGVMKRTGTTRDIRWFRGDACFVFHVMNAWEDGTKIVADVMQSEEAPLFTHPDGRRTDPEKGRARLCRWSFDLAGNTNAFKRSYLDDISGEFPRIDERRAGLRSGHGWYACASPETPMLGMLTGLVHVDGNGHRRARYLLPTGDTIGEPVFVPRKPDSAEADGWLLTVIWRSCENRSDLAVFNAADIAGGPIALVQLGHRVPDGFHGNWVAAG GT:EXON 1|1-467:0| BL:SWS:NREP 1 BL:SWS:REP 13->464|CCD_CROSA|4e-54|34.5|447/546| BL:PDB:NREP 1 BL:PDB:REP 18->463|2biwA|6e-46|33.6|440/479| RP:PDB:NREP 1 RP:PDB:REP 13->464|2biwA|e-124|30.9|446/479| RP:PFM:NREP 1 RP:PFM:REP 12->466|PF03055|3e-78|43.7|449/462|RPE65| HM:PFM:NREP 1 HM:PFM:REP 13->465|PF03055|1.1e-146|42.4|453/484|RPE65| RP:SCP:NREP 1 RP:SCP:REP 266->351|3btaA3|9e-10|19.3|83/528|d.92.1.7| OP:NHOMO 468 OP:NHOMOORG 216 OP:PATTERN ----------------------------1--------------------------------------- ----2---------13322-23--2322222252221121-1------------------------2-1---------------------------------------1-------------------------------------4542332111111111122124332111111111111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2221-------111---11111-------------------1--1----1------------1------------------------1-------------------------------13-2------111111-1111----11111-11----1--111------1--1------------------------------------------11--------------------------------------------------11111---------------------------------------------------------------------1--------------------------------------------1--1-------------------------------------------1---------------------------------1---1-------------------------------------------------------------------- ---------------222121--4332------1-1-111111---22--14A621211111------------------------------2-------1-2-----21136113-----12122-1-6B3-2321--11-1-11--112--1-112411--1----1----5-1346H66645695Q17E22----2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 454 STR:RPRED 97.2 SQ:SECSTR ############TTccccccEEEEcccEEEcccTTccEEEEEccccccEEEEcccGGGcccEEEEEEEcccccEEEEEEcccHHHHHHHHHTcccccTTccccccTHHHHTTcccccccEEEEETTEEEEEcTTcccEEEcTTTccEEEEccTTTTcTcccccccEEEcccTTcEEEEEEEEEccEEEEEEEEEcTTccEEEEEEEEEEccccccccEEcccEEEEEEccEEHHHTTcccGGGGEEEcTTccEEEEEEETTccccccEEEEEcccEEEEEEEEEEETTEEEEEEEEEccccccTcTTccGGGccGcccEEEEEEEETTTcTTEEEEEEEEcccEEEEEccGGGTTccccEEEEEEccccccccccccEEEEEETTTTEEEEEEcTTTEEccccEEEEcTTcccTTcEEEEEEEEETTTTEEEEEEEETTcTTccccEEEEccccccccccEEEEcT# DISOP:02AL 1-4,467-468| PSIPRED cccccccHHHHccccccccccccEEEEEEEEccccccEEEEEEcccccccccccccccccccEEEEEEEccEEEEEEEEEEcHHHHHHHHcccEEEEcccccccccHHcccccccccEEEEEEEccEEEEEEcccccEEEccccccEEEEEEcccccccccccccEEccccccEEEEEEEEccccccEEEEEEEcccccEEEEccEEcccccEEEEccccccEEEEEEccccccHHHHHcccccEEEccccccEEEEEEcccccccEEEEEEccEEEEEEEEEEEEccEEEEEEEEccccccccccccccccccccccEEEEEEEcccccccccEEEEEccccccccEEcHHHcccccEEEEEEEEcccccccccccEEEEEEEcccEEEEEEccccccccEEEEEcccccccccccEEEEEEEccccccEEEEEEEccccccccEEEEEEcccccccccEEEEEcc //