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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38586.1
DDBJ      :             Poly-beta-hydroxybutyrate polymerase-like
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  224/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:586 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   207->393 3c5lA PDBj 4e-42 13.4 %
:RPS:SCOP  222->561 1ju3A2  c.69.1.21 * 4e-14 10.6 %
:HMM:SCOP  207->512 1k8qA_ c.69.1.6 * 1.7e-46 26.2 %
:RPS:PFM   26->56 PF12551 * PHBC_N 4e-08 71.0 %
:RPS:PFM   95->264 PF07167 * PhaC_N 7e-48 52.1 %
:HMM:PFM   96->264 PF07167 * PhaC_N 7.8e-62 47.6 168/172  
:HMM:PFM   24->62 PF12551 * PHBC_N 1.2e-17 64.1 39/46  
:HMM:PFM   269->503 PF00561 * Abhydrolase_1 1.3e-13 21.2 208/231  
:BLT:SWISS 95->583 PHBC_AZOC5 e-114 42.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38586.1 GT:GENE ABE38586.1 GT:PRODUCT Poly-beta-hydroxybutyrate polymerase-like GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1516634..1518394 GB:FROM 1516634 GB:TO 1518394 GB:DIRECTION + GB:PRODUCT Poly-beta-hydroxybutyrate polymerase-like GB:PROTEIN_ID ABE38586.1 GB:DB_XREF GI:91682284 InterPro:IPR000073 InterPro:IPR000379 InterPro:IPR010941 LENGTH 586 SQ:AASEQ MLQTPSNPIAVAPQAPVRHVGSTDSDRSLHAALAPLTGGLSPTALSLAYADWLSHLFWAPARRLDLAQDALRGAAQLAQAAVHPAPPWSLITPQPQDRRFAGPEWRQPPFNLMAQSFLLAEEWWRDATTGIRGVSQQNAKIVEFAMRQMLDVFAPSNFALTNPEVIRRTLTSEGGNVTAGLRNWWEDLLQTMSHDTDLKHDFEVGRDVAVTPGKVVYSNDLIELIQYAPATGEVRPEPILIVPAWIMKYYILDLSPHNSLVKYLTEQGFTVFMVSWRNPTAKHRDLTLEDYRRLGVMAAIETIRAIVPHQPIHAVGYCLGGTLLSIAAAAMSRDGDDRLRSITLFAAQTDFTEAGELTLFINESQVAFLEDMMWKRGVLDTTQMAGAFQILRSNDLVWSRMVRDYLMGERSEPNDLMAWNADATRMPYRMHSEYLRKLFLDNDLAEGRYTVDDRAIALSDIHTPMFVVGTLRDHVAPWRSTFKIHLLADAEITFCLTGGGHNAGIVSPPSPKAHGYQVMMKEADGPYIGPDDWIKEAPHAEGSWWTEWVHWLEARSGQPVPPPRIGLPDTNAAELPDAPGHYVLQA GT:EXON 1|1-586:0| BL:SWS:NREP 1 BL:SWS:REP 95->583|PHBC_AZOC5|e-114|42.8|481/583| SEG 59->87|aparrldlaqdalrgaaqlaqaavhpapp| RP:PDB:NREP 1 RP:PDB:REP 207->393|3c5lA|4e-42|13.4|179/217| RP:PFM:NREP 2 RP:PFM:REP 26->56|PF12551|4e-08|71.0|31/46|PHBC_N| RP:PFM:REP 95->264|PF07167|7e-48|52.1|169/169|PhaC_N| HM:PFM:NREP 3 HM:PFM:REP 96->264|PF07167|7.8e-62|47.6|168/172|PhaC_N| HM:PFM:REP 24->62|PF12551|1.2e-17|64.1|39/46|PHBC_N| HM:PFM:REP 269->503|PF00561|1.3e-13|21.2|208/231|Abhydrolase_1| GO:PFM:NREP 2 GO:PFM GO:0008415|"GO:acyltransferase activity"|PF07167|IPR010941| GO:PFM GO:0042619|"GO:poly-hydroxybutyrate biosynthetic process"|PF07167|IPR010941| RP:SCP:NREP 1 RP:SCP:REP 222->561|1ju3A2|4e-14|10.6|312/347|c.69.1.21| HM:SCP:REP 207->512|1k8qA_|1.7e-46|26.2|305/0|c.69.1.6|1/1|alpha/beta-Hydrolases| OP:NHOMO 370 OP:NHOMOORG 233 OP:PATTERN ------------------------1--111------------------------------------11 --------------------------------------31------------------------------------------2-----------------------------------------------------11111-------11--1-----------1-----------------------------111111111111111------111-----------------------------------------------------------------------------------------------------------------------------------1-----------3--------------3112-----3252411222222------------12411311113-111111221111221212132222112--------2---2222-------------122--1--1--1-----2211-1111121121222122222322221222322231122122112122211214----11----------533--1-------------------------1------------------------------111-211-----------1------1--------531--------------------------------------------------------------------------------------------------2444-231----------------111111----2-2222222222222112--------------211111111111111111111------1-------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1--------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 302 STR:RPRED 51.5 SQ:SECSTR ##############################################################################################################################################################################################################HHHHHHHHHHHTcTTccccccGGGGccGGGcccccEEEEEETccEEEEcTTccEEEEEcTTccEEEEEGGGccGGGHHHHHHHHHHHHHcccTTTTcccccccccHcEEEEEEETTEEEEEETHHHHTccEEEEETTETccEEEEETTTTEEEEEcTTccHHHTTTcccHHHHHHHHHHHHHHHHHHHHHHcccTTccccccTTTTTTTTcccccccccccccccccHHHHHHHHHHHHHHTHHHHHGGGTTccccccEEEEEETTcccccGGGGTTGGGTcTTcEEEEEccccccHHHHcH############################################################################## DISOP:02AL 1-6,8-21,558-566,586-587| PSIPRED ccccccccccccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHHHcHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEcccEEEEEEEccccccccccEEEEcccccccHHcccccHHHHHHHHHHccccEEEEccccccHHHccccHHHHHHHHHHHHHHHHHHHccccccEEEEEcHHHHHHHHHHHHHHHHccccccEEEEEEccccccccccccHHccHHHHHHHHHHHcccccccHHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccEEEccEEEcHHHccccEEEEEccccccccHHHHHHHHHHccccEEEEEEccccEEEEEcccccHHHHHHHcccccccccccHHHHHHccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccc //