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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38609.1
DDBJ      :             ErfK/YbiS/YcfS/YnhG
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  309/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
b.160.1
:250 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   164->222 1y7mA PDBj 3e-11 51.7 %
:RPS:SCOP  90->223 1y7mA1  b.160.1.1 * 3e-27 32.4 %
:HMM:SCOP  87->224 1y7mA1 b.160.1.1 * 2.3e-34 43.5 %
:RPS:PFM   93->221 PF03734 * YkuD 1e-09 44.9 %
:HMM:PFM   95->222 PF03734 * YkuD 9.7e-20 31.8 110/116  
:BLT:SWISS 96->220 YBIS_ECOLI 2e-18 45.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38609.1 GT:GENE ABE38609.1 GT:PRODUCT ErfK/YbiS/YcfS/YnhG GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1541009..1541761 GB:FROM 1541009 GB:TO 1541761 GB:DIRECTION + GB:PRODUCT ErfK/YbiS/YcfS/YnhG GB:PROTEIN_ID ABE38609.1 GB:DB_XREF GI:91682307 InterPro:IPR005490 LENGTH 250 SQ:AASEQ MITSGIASRRSSMAPLVAFAAAILLTAALPGGASAQMLGYAAAPQAGPFEADDEIMAAPPRTASPDEAVGGDDAQLADRLRRQVVAYDGNQPAGTIVIDTANTYLYYVLGGGRAIRYGVGVGREGFTWAGTQTITRKAEWPDWHPPAQMIARQPYLPRFMAGGPGNPLGARAMYLGSTQYRIHGTNDPSTIGKYVSSGCIRLTNEDVADLFSRANIGARVVVLPKSSPNREARKARPDRQAMIISVSSVD GT:EXON 1|1-250:0| BL:SWS:NREP 1 BL:SWS:REP 96->220|YBIS_ECOLI|2e-18|45.5|121/306| TM:NTM 1 TM:REGION 11->33| SEG 16->29|lvafaaailltaal| BL:PDB:NREP 1 BL:PDB:REP 164->222|1y7mA|3e-11|51.7|58/161| RP:PFM:NREP 1 RP:PFM:REP 93->221|PF03734|1e-09|44.9|127/136|YkuD| HM:PFM:NREP 1 HM:PFM:REP 95->222|PF03734|9.7e-20|31.8|110/116|YkuD| RP:SCP:NREP 1 RP:SCP:REP 90->223|1y7mA1|3e-27|32.4|111/116|b.160.1.1| HM:SCP:REP 87->224|1y7mA1|2.3e-34|43.5|115/0|b.160.1.1|1/1|L,D-transpeptidase catalytic domain-like| OP:NHOMO 882 OP:NHOMOORG 310 OP:PATTERN -------------------------------------------------------------------- -11----------------------------------------------------------------------------------122------------------------------------------------------------11--1--11-1-111--1---12--------------------1111111112222222221111222222221---------12-----------------------------------------------------------------------------------------------111-111-1-1111------1------1--2121-----------11-----1111168B9966788A9855554454548-BDABF8AA78--6775A9A9998867---A146666323------------------------------------------------------------------------------------------------------------1-------11-------------------222-2121122-2--11-------------------------22331-1-1---111111111111111111111-11111------43222314444444444-4444444444444444444444221114434444444434344243444431-1-1-11111111-1--1111111112-11------------------------1-1-11111111111111111-------------11111111111----------------1------------------------------------------------11111--- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 58 STR:RPRED 23.2 SQ:SECSTR ###################################################################################################################################################################ccGGGTTEEEEEccTTcEEEccccGGGTTcEEEcccEE#cHHHHHHHHHHccTTcEEEE############################ DISOP:02AL 1-8,228-237,250-251| PSIPRED ccccccHHcccccHHHHHHHHHHHHHHccccHHHHHHccccccccccccccHHHHHHHccccccccccccccccccccccccEEEccccccccEEEEEEccccEEEEEEccEEEEEEEEEEcccccccEEEEEEEEEEEcccccccHHHHHcccccccccccccccccccEEEEccccEEEEEccccccccccccccccEEccHHHHHHHHHHcccccEEEEEEcccccccccccccccccEEEEEEEcc //