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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38657.1
DDBJ      :             Cupin 2, conserved barrel
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  31/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.82.1
:95 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->94 2oziB PDBj 1e-35 78.9 %
:RPS:PDB   6->91 2eaaB PDBj 5e-09 21.2 %
:RPS:SCOP  12->91 1pmiA  b.82.1.3 * 6e-09 15.2 %
:HMM:SCOP  12->93 1o4tA_ b.82.1.9 * 2.6e-11 30.4 %
:RPS:PFM   23->89 PF07883 * Cupin_2 3e-04 43.5 %
:HMM:PFM   21->91 PF07883 * Cupin_2 3.6e-12 30.9 68/71  
:BLT:SWISS 23->92 BACB2_BACSU 8e-04 28.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38657.1 GT:GENE ABE38657.1 GT:PRODUCT Cupin 2, conserved barrel GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1585398..1585685 GB:FROM 1585398 GB:TO 1585685 GB:DIRECTION + GB:PRODUCT Cupin 2, conserved barrel GB:PROTEIN_ID ABE38657.1 GB:DB_XREF GI:91682355 InterPro:IPR007113 InterPro:IPR013096 LENGTH 95 SQ:AASEQ MTVAAQSEVQVDNAEVRVTEWRLPPGAATGPHRHGMDYVIVPVADGEMTIVAPDGARAKAQLKTGKSYFRKAGVEHDVLNETATEIVFLEVELKV GT:EXON 1|1-95:0| BL:SWS:NREP 1 BL:SWS:REP 23->92|BACB2_BACSU|8e-04|28.4|67/100| BL:PDB:NREP 1 BL:PDB:REP 2->94|2oziB|1e-35|78.9|90/93| RP:PDB:NREP 1 RP:PDB:REP 6->91|2eaaB|5e-09|21.2|85/380| RP:PFM:NREP 1 RP:PFM:REP 23->89|PF07883|3e-04|43.5|62/70|Cupin_2| HM:PFM:NREP 1 HM:PFM:REP 21->91|PF07883|3.6e-12|30.9|68/71|Cupin_2| RP:SCP:NREP 1 RP:SCP:REP 12->91|1pmiA|6e-09|15.2|79/440|b.82.1.3| HM:SCP:REP 12->93|1o4tA_|2.6e-11|30.4|79/0|b.82.1.9|1/1|RmlC-like cupins| OP:NHOMO 31 OP:NHOMOORG 31 OP:PATTERN -------------------------------------------------------------------- -------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111---1111---------------1--1-1-1--1--1--------1-----1-----------------------------------------------------------11111---------------------1--1--1------------1--1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 94 STR:RPRED 98.9 SQ:SECSTR EEEcTHcGGGGGGTTcEEEEEEEcTTEEEEEEEEEEEEEEEEEccEEEEEEccccEEEEEEEcTTEEEEEcTTcEEEEEEccccccEEEEEccc# DISOP:02AL 1-4| PSIPRED ccccccEEEEEcccEEEEEEEEEccccccccccccccEEEEEEcccEEEEEcccccEEEEEEEccccccccccccccEEccccccEEEEEEEEEc //