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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38662.1
DDBJ      :             diguanylate cyclase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  628/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
d.58.29
:247 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   84->193 3ignA PDBj 7e-17 33.9 %
:RPS:PDB   82->205 3btaA PDBj 8e-39 10.7 %
:RPS:SCOP  87->208 1w25A3  d.58.29.2 * 3e-27 32.0 %
:HMM:SCOP  87->236 1w25A3 d.58.29.2 * 1.9e-43 43.3 %
:RPS:PFM   85->208 PF00990 * GGDEF 2e-19 45.2 %
:HMM:PFM   82->236 PF00990 * GGDEF 7.7e-38 40.0 155/161  
:HMM:PFM   53->84 PF05524 * PEP-utilisers_N 0.00094 38.7 31/123  
:BLT:SWISS 85->207 YDDV_SHIBS 9e-17 33.3 %
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38662.1 GT:GENE ABE38662.1 GT:PRODUCT diguanylate cyclase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1589105..1589848 GB:FROM 1589105 GB:TO 1589848 GB:DIRECTION + GB:PRODUCT diguanylate cyclase GB:PROTEIN_ID ABE38662.1 GB:DB_XREF GI:91682360 InterPro:IPR000160 LENGTH 247 SQ:AASEQ MKKTPSRPSESHRSGRKVAAGPVAEELPRSAAGASQAAPDEAPARAGAGAGRLPSDPQAKIRRLKAQLAAALAQIEELRASAETDFLLGISNRRGFERELNRALAYIKRYGAAGALILLDVDRLKPVNDTFGHAAGDVVLKSVVEALLSHVRASDLIGRLGGDEFALLLWNLSEADAHMKAAALEQTVDQLVIRFGTHTVAAGVSAGVAMLTADMDAAGALACADRAMYARKAERRAAEGKPDPVRR GT:EXON 1|1-247:0| BL:SWS:NREP 1 BL:SWS:REP 85->207|YDDV_SHIBS|9e-17|33.3|123/460| COIL:NAA 28 COIL:NSEG 1 COIL:REGION 58->85| SEG 28->55|prsaagasqaapdeaparagagagrlps| SEG 59->80|akirrlkaqlaaalaqieelra| SEG 209->238|amltadmdaagalacadramyarkaerraa| BL:PDB:NREP 1 BL:PDB:REP 84->193|3ignA|7e-17|33.9|109/161| RP:PDB:NREP 1 RP:PDB:REP 82->205|3btaA|8e-39|10.7|121/1277| RP:PFM:NREP 1 RP:PFM:REP 85->208|PF00990|2e-19|45.2|124/160|GGDEF| HM:PFM:NREP 2 HM:PFM:REP 82->236|PF00990|7.7e-38|40.0|155/161|GGDEF| HM:PFM:REP 53->84|PF05524|0.00094|38.7|31/123|PEP-utilisers_N| RP:SCP:NREP 1 RP:SCP:REP 87->208|1w25A3|3e-27|32.0|122/162|d.58.29.2| HM:SCP:REP 87->236|1w25A3|1.9e-43|43.3|150/0|d.58.29.2|1/1|Nucleotide cyclase| OP:NHOMO 7098 OP:NHOMOORG 635 OP:PATTERN -------------------------------------------------------------------- E9258---111---14211-1B22-111111-73333C55CA9OU-------324-----643-8295442---------9167BF56--------------------1----------------111-111--51ACC8811184aQOCHH223DD---1--7F7-DCH3------------L6654881592777775672767777-222327764549-BB1221239A-1111111111111111111--1--------22---1--1--------------------------------------------------4A73D33333533433A555444517--5475AFEF947568422452--9276993-----27UNO76DUNHQQ2366256456H-RQINM8MN6S5-EMMLSOKQRTAARC7D9271AC78764--------A992-Z9O11111111111111111111111-11111-76AB3A7641HBDDEFD888799OW999938GLJBLDL-3KKIVHTGKS12hA6QNTSHWXTF-------36EHjl4GOGFIJN9dRHGL1JDJWGMDVM64468664B443----------------PBEK932QOFMZUjGZObjdcdbZcQgdbRUXSPPng---AUCf------BFHB1H7CCCBCBBBCA-9CBCC79BCAAABBCCBBBBEBCE---8489888888788897C5753249--D34444433444---O-----FGFFE9gCa---------------5455528-1-EVNNMMVVXSWVWTTOSRS-----1---RHMMILLKKLGKJaZIKFJFJHBBB1111--X17744BB--------414-------------------------7738669666-1- -----------------------------------------------------------------------------------------------1--------------------------------------------------------------2--------------42----------1--8-----5---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 127 STR:RPRED 51.4 SQ:SECSTR #################################################################################HHHHHHHHHHHHHHTcHHHHHHHHHHHHccccccccTTccTTcccccGGGEEEEEcTTccEEEEEccEEEEEccccTTccEEEcccccccTTTccccccEEEEccccEEcEEEccccGGGTcTTEEE####################################### DISOP:02AL 1-52,231-248| PSIPRED ccccccccccccccccccccccccHHccHHHccccccccccccHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEccEEEEEEEccccHHHHHHHHHHHHHHHHHccEEEccEEEEEEEEEEHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccc //