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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38675.1
DDBJ      :             binding-protein-dependent transport systems inner membrane component
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  223/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.96.2f.58.1
:548 amino acids
:PSIPRED
:DISOPRED
:RPS:PDB   175->199 3dhwA PDBj 5e-10 52.0 %
:RPS:SCOP  164->199 3dhwA1  f.58.1.1 * 1e-05 36.1 %
:RPS:SCOP  175->233 2o34A1  d.96.2.2 * 3e-07 17.9 %
:RPS:SCOP  327->516 2r6gF2  f.58.1.1 * 4e-04 10.4 %
:RPS:PFM   164->199 PF00528 * BPD_transp_1 1e-04 55.6 %
:HMM:PFM   73->257 PF00528 * BPD_transp_1 1.6e-15 31.1 161/185  
:HMM:PFM   356->541 PF00528 * BPD_transp_1 2.5e-13 25.6 164/185  
:BLT:SWISS 175->222 POTC_SHIFL 8e-05 37.5 %
:PROS 257->274|PS00216|SUGAR_TRANSPORT_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38675.1 GT:GENE ABE38675.1 GT:PRODUCT binding-protein-dependent transport systems inner membrane component GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(1605695..1607341) GB:FROM 1605695 GB:TO 1607341 GB:DIRECTION - GB:PRODUCT binding-protein-dependent transport systems inner membrane component GB:PROTEIN_ID ABE38675.1 GB:DB_XREF GI:91682373 InterPro:IPR000515 InterPro:IPR005829 LENGTH 548 SQ:AASEQ MRASVRASRVEFIALGIALLVGLMVAAPVISLAVTALQPAVDIWPHLLAYVLPQSLRDTALLLAGVGTLTLLIGAGTAWLVSSHDFPGRALLIWLLPLPLAVPTYLSAYVYVDLFEPLGLAHRTLTLLMPAAEAVHWLPHLRSLPGAVLLLALVLYPYVFLSARAVFQAQSADAIEAARTLGAGRFTILRRVILPMARPALAVGVALAALETLNDIGASEYLGVRTLTVSVFSTWLNRGSLAGAAQLSLVLLGFAALLITVERIGRRNANVEFSAENPRLRPRTKLAGLKGSLAFAACLLPALLGFIVPAAYLLGESLRRSLAGRIDPSLWRDALHTVTLASIATALALMLGLIVILAARWRPGRTATAAVSVAQLGYALPGLVLALGLLAPLLALDGAIATFAQSIGLASPGLLLMSSGGAVIAAYVIRFLAVPTGLLKAGFERIPRDYDDSARAAGASRLVTLAKIDLPLLKPALLGAAILVFVDCLKELPATLLLRPLNVDTLSTSIYQYASRGSFEEGALAALIIVAASIPPVIWLTRFSDLPE GT:EXON 1|1-548:0| BL:SWS:NREP 1 BL:SWS:REP 175->222|POTC_SHIFL|8e-05|37.5|48/264| PROS 257->274|PS00216|SUGAR_TRANSPORT_1|PDOC00190| TM:NTM 12 TM:REGION 20->42| TM:REGION 58->80| TM:REGION 82->104| TM:REGION 143->165| TM:REGION 192->214| TM:REGION 243->265| TM:REGION 291->313| TM:REGION 337->359| TM:REGION 373->395| TM:REGION 412->434| TM:REGION 466->488| TM:REGION 521->543| SEG 59->80|talllagvgtltlligagtawl| SEG 91->100|lliwllplpl| SEG 144->161|lpgavlllalvlypyvfl| SEG 200->210|alavgvalaal| SEG 247->258|lslvllgfaall| SEG 293->304|lafaacllpall| SEG 376->401|lgyalpglvlalgllapllaldgaia| SEG 465->483|lakidlpllkpallgaail| SEG 523->538|alaaliivaasippvi| RP:PDB:NREP 1 RP:PDB:REP 175->199|3dhwA|5e-10|52.0|25/203| RP:PFM:NREP 1 RP:PFM:REP 164->199|PF00528|1e-04|55.6|36/195|BPD_transp_1| HM:PFM:NREP 2 HM:PFM:REP 73->257|PF00528|1.6e-15|31.1|161/185|BPD_transp_1| HM:PFM:REP 356->541|PF00528|2.5e-13|25.6|164/185|BPD_transp_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 3 RP:SCP:REP 164->199|3dhwA1|1e-05|36.1|36/203|f.58.1.1| RP:SCP:REP 175->233|2o34A1|3e-07|17.9|56/248|d.96.2.2| RP:SCP:REP 327->516|2r6gF2|4e-04|10.4|190/244|f.58.1.1| OP:NHOMO 227 OP:NHOMOORG 223 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------11-------11111111111------111----111111-111111-----------------------------------------1------1---------------------------------------------------------------------------------------------------------------11--------------1--------------------------------11111111111111111-111111111-1--22---1---1111-111111111111---------------111111---11---------------1111------11111111111-111111--1111111--1-1------111111111111111---11-------1-1111----1-1---1-----------1------------------------------------111-1-1111111111-1111111111111----111----------1-----------------------------------22--------------------------------------------1----------1111-----------1111-------1111111111111111111111----------11111111111111--------------11--------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-7,267-286,547-549| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccHHHHHHHHHHHHHHccHHHHHHHHHHHHcccHHHHHHHHHHHccccccEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccEEEEcccccccHHHHHHHHHcccHHHHHHHHHHHHHHcccccEEEEcccccccc //