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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38738.1
DDBJ      :             short-chain dehydrogenase/reductase SDR
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  880/915 : Eukaryota  193/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:253 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->252 2uvdA PDBj 2e-43 40.8 %
:RPS:PDB   12->241 1a9zA PDBj 2e-43 15.3 %
:RPS:SCOP  13->250 1pwxA  c.2.1.2 * 6e-45 26.8 %
:HMM:SCOP  5->249 1zemA1 c.2.1.2 * 4.1e-78 41.8 %
:RPS:PFM   13->176 PF00106 * adh_short 3e-19 43.6 %
:HMM:PFM   12->177 PF00106 * adh_short 7.4e-35 28.0 161/167  
:BLT:SWISS 13->252 FABG_BACSU 7e-42 38.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38738.1 GT:GENE ABE38738.1 GT:PRODUCT short-chain dehydrogenase/reductase SDR GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1672261..1673022 GB:FROM 1672261 GB:TO 1673022 GB:DIRECTION + GB:PRODUCT short-chain dehydrogenase/reductase SDR GB:PROTEIN_ID ABE38738.1 GB:DB_XREF GI:91682436 InterPro:IPR002198 InterPro:IPR002347 InterPro:IPR002424 LENGTH 253 SQ:AASEQ MDPLFDVSREFVLVTGASQGLGRQFARVLAERGAGIVLAARQIDKLKSLEQEIKDKGGRAVAVPLDVTDLASMATAIDRGEAALGPVTVLINNAGIAVEKLAVEQSEADWDAVIGANLKGAYFLATEVARRMIARQQGGNIVNIASVLGDSVMKFLSPYAVSKAGIIQATKALALELASARIRVNALAPGYIDTDINHAFWSTPGGEKLIKGIPQRRVGHESDLDGAILLLASNASRYMTGSVVTVDGGFLLA GT:EXON 1|1-253:0| BL:SWS:NREP 1 BL:SWS:REP 13->252|FABG_BACSU|7e-42|38.2|238/246| BL:PDB:NREP 1 BL:PDB:REP 13->252|2uvdA|2e-43|40.8|238/246| RP:PDB:NREP 1 RP:PDB:REP 12->241|1a9zA|2e-43|15.3|229/338| RP:PFM:NREP 1 RP:PFM:REP 13->176|PF00106|3e-19|43.6|163/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 12->177|PF00106|7.4e-35|28.0|161/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 13->250|1pwxA|6e-45|26.8|231/252|c.2.1.2| HM:SCP:REP 5->249|1zemA1|4.1e-78|41.8|244/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 20223 OP:NHOMOORG 1129 OP:PATTERN 2211246AB9B9A99729353221C338777922---------21154--722-34223143953155 MLh5x31566E786***XW-X*66u*XWXXXj****t***6*F*cOFB4IE2TKNB5F11PKd6OLfkmYD111121222B8Y1122388A728331--B8a3EH*DiAQ111111111111115977BGA75CA9JKKQN222KBMFKLA997733333763394GMFhB223243243323LE9CD771IASIIJIJLILGKLJKKKRIQQIRJKICIJROKGB999B8Om966656546666665DAADCA2C3BD36232CF55AA98A8BBA987787878466555555655555766777877766565332666A535AD6665455547956628A77331199422A6123325333366534H2LuOOd22222WJ*st7AEhTbZRMNNMLLNLNNc-ORaPNuOck*l1*rrUuny*****ZiLWHRYZRLQVNIRDDDDDDDDVXVHAFHD33222222221222331221222121112AJ**V8JpfTm*x****UZZaVpp**dcccDW*g*e**p49WXTNEOMMeOjPzrALB6D7EF9233222258EOM9AT9G412211433427A85F6486ADGCUc352433233225324222222272336A9EC8DHIGCQG79999B8EEB998F8EC99F1-3436A111111EIHK7LAEHHFEEEEGG-HGFGHDEFHFHEGFFEGFFSZSIA9BCC9ABBCCBCCBABABCXEEBEDCE51ABBBBBBABBBB111A56455GIGG6KQOJ111939222222464RSRWTDOAGEOBZaTWOWelQRQYULXQT8554465454667I87887CD8BDOPQNQMKDEG96763376ED87B9--------1-4----1-1-3-1------3-------54432666765I3 11--MHM-C5418FLt*vj*pxl****SRHMLNPQQMVMRKURMLLeai*v***fkdSRRKQGDQ88B5F44MEJ67467CHHHNH6D-a*S*PlNJHJIIFJXNL-QkH*jwfjcHDAEBJYEgW6V9i*W-SWeEDHEXFLZO6ICBAY48UDQNepz*cJ*eYOdTkwObjeAGG8*766DaQkn*k*XJHhRTQI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 253 STR:RPRED 100.0 SQ:SECSTR GGGGTccTTcEEEEETTTcHHHHHHHHHHHHTTcEEEEEEccccccTTHHHHHHHHHTcccEEEEccTTcHHHHHHHHHHTTccEEEEccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHTccEEEEEEEGTGGGcccccccccTTccccccccHHHHHHHHHHHHHHHHHHHcTTcEEEEEEEcEEEcccTTcccccccccccccHHHHHHHHTTccccEEEEcccccccccccEEccEEEEcTTGGGc DISOP:02AL 1-2| PSIPRED ccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccEEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccccccHHHHHHccHHHHHHHHHcccccccccHHHHHHHHHHHHcHHHccccccEEEEccccccc //