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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38786.1
DDBJ      :             ribulose 1,5-bisphosphate carboxylase large subunit
Swiss-Prot:RBL1A_RHOPS  RecName: Full=Ribulose bisphosphate carboxylase large chain 1;         Short=RuBisCO large subunit 1;         EC=4.1.1.39;

Homologs  Archaea  26/68 : Bacteria  160/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
c.1.14d.58.9
:472 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   15->459 1svdA PDBj 0.0 80.7 %
:RPS:PDB   10->465 1ej7L PDBj e-172 63.6 %
:RPS:SCOP  13->139 1aa1B2  d.58.9.1 * 2e-37 46.5 %
:RPS:SCOP  141->455 1aa1B1  c.1.14.1 * e-129 69.0 %
:HMM:SCOP  3->141 1bwvA2 d.58.9.1 * 6.4e-50 59.7 %
:HMM:SCOP  142->467 1gk8A1 c.1.14.1 * 1.3e-143 56.4 %
:RPS:PFM   16->133 PF02788 * RuBisCO_large_N 2e-30 50.0 %
:RPS:PFM   146->437 PF00016 * RuBisCO_large e-131 71.8 %
:HMM:PFM   146->454 PF00016 * RuBisCO_large 7.9e-166 69.6 309/309  
:HMM:PFM   14->137 PF02788 * RuBisCO_large_N 1.4e-61 62.9 124/126  
:BLT:SWISS 1->472 RBL1A_RHOPS 0.0 100.0 %
:PROS 188->196|PS00157|RUBISCO_LARGE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38786.1 GT:GENE ABE38786.1 GT:PRODUCT ribulose 1,5-bisphosphate carboxylase large subunit GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(1726832..1728250) GB:FROM 1726832 GB:TO 1728250 GB:DIRECTION - GB:PRODUCT ribulose 1,5-bisphosphate carboxylase large subunit GB:PROTEIN_ID ABE38786.1 GB:DB_XREF GI:91682484 InterPro:IPR000685 LENGTH 472 SQ:AASEQ MLKSYQAGVREYRETYWDPHYTPKDSDILAVFKVIPQAGVPREEAAAAVCAESSTATWTTVWTDLLTDLDYYKGRAYAIEDVPGDDEAFYAFVAYPMGLFEEGSIVNVFTSLVGNVFGFKAVRALRLEDVRFPLWFVTTCDGPPHGIQVERDKLDKYGRPMLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFEFCQEAIEKAEQETGERKGHYLNVTAPNMEEIYRRAEFAKEIGSPIIMSDYLTIGWAAHSSLSRWCRANGMLLHVHRAMHGVIDRNPRHGINFRVLAKLLRLLGGDHLHSGTVVGKLEGDRAATLGWVDLMRERHVKEDRSRGLFFDQPWGHMAPVMPVASGGIHVWHMPALLAIFGDDAVFQFGGGTLGHPWGNAAGAAANRVALEACVRARNEGRDVEREGKDILTAAAQSSPELKVAMETWREIKFEFDVVDKLDAPHR GT:EXON 1|1-472:0| SW:ID RBL1A_RHOPS SW:DE RecName: Full=Ribulose bisphosphate carboxylase large chain 1; Short=RuBisCO large subunit 1; EC=4.1.1.39; SW:GN Name=cbbL1; OrderedLocusNames=RPD_1549; SW:KW Calvin cycle; Carbon dioxide fixation; Complete proteome; Lyase;Magnesium; Metal-binding; Monooxygenase; Oxidoreductase;Photosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->472|RBL1A_RHOPS|0.0|100.0|472/472| GO:SWS:NREP 8 GO:SWS GO:0019253|"GO:reductive pentose-phosphate cycle"|Calvin cycle| GO:SWS GO:0015977|"GO:carbon fixation"|Carbon dioxide fixation| GO:SWS GO:0016829|"GO:lyase activity"|Lyase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0004497|"GO:monooxygenase activity"|Monooxygenase| GO:SWS GO:0016491|"GO:oxidoreductase activity"|Oxidoreductase| GO:SWS GO:0055114|"GO:oxidation reduction"|Oxidoreductase| GO:SWS GO:0015979|"GO:photosynthesis"|Photosynthesis| PROS 188->196|PS00157|RUBISCO_LARGE|PDOC00142| SEG 43->70|eeaaaavcaesstatwttvwtdlltdld| SEG 404->412|gnaagaaan| BL:PDB:NREP 1 BL:PDB:REP 15->459|1svdA|0.0|80.7|445/445| RP:PDB:NREP 1 RP:PDB:REP 10->465|1ej7L|e-172|63.6|456/457| RP:PFM:NREP 2 RP:PFM:REP 16->133|PF02788|2e-30|50.0|118/123|RuBisCO_large_N| RP:PFM:REP 146->437|PF00016|e-131|71.8|291/292|RuBisCO_large| HM:PFM:NREP 2 HM:PFM:REP 146->454|PF00016|7.9e-166|69.6|309/309|RuBisCO_large| HM:PFM:REP 14->137|PF02788|1.4e-61|62.9|124/126|RuBisCO_large_N| GO:PFM:NREP 7 GO:PFM GO:0000287|"GO:magnesium ion binding"|PF02788|IPR017444| GO:PFM GO:0015977|"GO:carbon fixation"|PF02788|IPR017444| GO:PFM GO:0016984|"GO:ribulose-bisphosphate carboxylase activity"|PF02788|IPR017444| GO:PFM GO:0000287|"GO:magnesium ion binding"|PF00016|IPR000685| GO:PFM GO:0009536|"GO:plastid"|PF00016|IPR000685| GO:PFM GO:0015977|"GO:carbon fixation"|PF00016|IPR000685| GO:PFM GO:0016984|"GO:ribulose-bisphosphate carboxylase activity"|PF00016|IPR000685| RP:SCP:NREP 2 RP:SCP:REP 13->139|1aa1B2|2e-37|46.5|127/127|d.58.9.1| RP:SCP:REP 141->455|1aa1B1|e-129|69.0|310/311|c.1.14.1| HM:SCP:REP 3->141|1bwvA2|6.4e-50|59.7|139/144|d.58.9.1|1/1|RuBisCO, large subunit, small (N-terminal) domain| HM:SCP:REP 142->467|1gk8A1|1.3e-143|56.4|326/0|c.1.14.1|1/1|RuBisCo, C-terminal domain| OP:NHOMO 262 OP:NHOMOORG 194 OP:PATTERN --1-11----------1------2---1---1---11------1111111111-1111111------- ---1------------------------------------------------11-------------------------------1---------------------1-1---------------11111111111---------11121222111111111111111111111111111111--------1111111111111111111-1111111111--11------11---------------------------------------------------------------------------------------------------------------------------------------------------------112332-33434----------2---1--2---1--1---1121112212----112323-----------2----121------------------------------------1---1------------11--------21-21-----12---11212---12------------111--1---------------------------------------------------------33---------------------------------1221------------------------------------------------------------------------------------------------------1--11--------------------------------------1--------------3----------------------------11--------------------------------------------------1---1-- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1--11---838--1------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 466 STR:RPRED 98.7 SQ:SECSTR ##cTTccccccTHHHHccTTccccTTcEEEEEEEEEcTTccHHHHHHHHHHHTTTccccccGGGGcccHHHHccEEEEEEEcccccccEEEEEEEcGGGccTTcHHHHHHHHHccGGGcTTEEEEEEEEEEccHHHHTTcccccccHHHHHHHHTcccccEEEEEccccccccHHHHHHHHHHHHHTTccEEEccTTccccTTccHHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHTccEEEEEHHHHcHHHHHHHHHHHHHHTcEEEEEcTTHHHHHcccccEEcHHHHHHHHHHHcccEEEccccTTccTTHHHHHHHHHHHHHccEEcccGGGTccccEEcTTccccEEEEEccccGGGHHHHHHHHccccEEEEcTTTTTcTTcHHHHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHccHHHHHHTHHHHHHHTccccccccc#### DISOP:02AL 1-2,466-473| PSIPRED cccccccccccHHHHccccccccccccEEEEEcccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHcccEEEEEccccccccEEEEEEEccccccccccHHHHHHHHHHHHcccccccccEEEEEEccHHHHHccccccccHHHHHHHccccccEEEEEEEcccccccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHHHcccEEEccccccEEEcccHHccccHHHHHHHHHHccccEEEcccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccEEEcccccccccccHHHHcccccEEEEEccccccccccccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHccHHHHHHHcccccEEEccccccccccccc //