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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38799.1
DDBJ      :             RTX toxins and related Ca2+-binding proteins-like
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  178/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
b.80.7
:769 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   306->416 2zj7A PDBj 4e-12 45.9 %
:BLT:PDB   472->517 1mdaH PDBj 2e-04 41.3 %
:RPS:PDB   301->419 2agmA PDBj 2e-18 24.4 %
:RPS:SCOP  298->416 1af0A1  b.80.7.1 * 3e-08 23.5 %
:HMM:SCOP  145->349 1k7iA1 b.80.7.1 * 6.4e-09 39.0 %
:HMM:SCOP  298->418 1satA1 b.80.7.1 * 1.8e-29 49.6 %
:HMM:SCOP  381->482 1g9kA1 b.80.7.1 * 3.1e-23 60.8 %
:HMM:SCOP  449->612 1kapP1 b.80.7.1 * 7.4e-16 39.4 %
:HMM:SCOP  580->724 1g9kA1 b.80.7.1 * 1.4e-06 30.6 %
:RPS:PFM   57->121 PF06075 * DUF936 1e-04 30.8 %
:RPS:PFM   360->416 PF08548 * Peptidase_M10_C 7e-06 48.2 %
:RPS:PFM   637->667 PF02382 * RTX 2e-04 45.2 %
:HMM:PFM   320->337 PF00353 * HemolysinCabind 0.00055 44.4 18/18  
:HMM:PFM   338->354 PF00353 * HemolysinCabind 1.4e-05 47.1 17/18  
:HMM:PFM   356->372 PF00353 * HemolysinCabind 3.2e-05 58.8 17/18  
:HMM:PFM   374->391 PF00353 * HemolysinCabind 2.7e-07 61.1 18/18  
:HMM:PFM   392->409 PF00353 * HemolysinCabind 5.5e-07 66.7 18/18  
:HMM:PFM   411->427 PF00353 * HemolysinCabind 8.8e-06 70.6 17/18  
:HMM:PFM   428->444 PF00353 * HemolysinCabind 0.00041 58.8 17/18  
:HMM:PFM   447->463 PF00353 * HemolysinCabind 1.9e-05 76.5 17/18  
:BLT:SWISS 301->408 RTX12_ACTPL 2e-18 47.7 %
:BLT:SWISS 612->685 ALGE2_AZOVI 4e-06 34.5 %
:PROS 326->344|PS00330|HEMOLYSIN_CALCIUM
:PROS 389->407|PS00330|HEMOLYSIN_CALCIUM
:PROS 416->434|PS00330|HEMOLYSIN_CALCIUM
:REPEAT 3|315->347|351->383|387->419
:REPEAT 2|500->560|599->659
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38799.1 GT:GENE ABE38799.1 GT:PRODUCT RTX toxins and related Ca2+-binding proteins-like GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1751808..1754117 GB:FROM 1751808 GB:TO 1754117 GB:DIRECTION + GB:PRODUCT RTX toxins and related Ca2+-binding proteins-like GB:PROTEIN_ID ABE38799.1 GB:DB_XREF GI:91682497 InterPro:IPR001343 LENGTH 769 SQ:AASEQ MITAKPIRQSESKTPTREDYVSEESDKRRWVPLAFLLFLTGCAAYLKSFMPVGLEAREEGKPKPPGGDDEAAGPKPDEAIATEDDDLTTASIRPQPKSSDNVIPVRFALSKDGAVVMTSAPPLSSNDQPPPVTIDRSTFGDRPGAPNDNRAGNPGGGGGGGGGGGGGGGGGSGDRGSGNDGPLRPPPERPPSVNPPTSENQRNRAPRVTGPVYLSNVVGCEGMTIAVLALLAGATDPDGDALRVLGVKSSSGTLKQADDGSWVFARDQGMLGEVTLTYWITDGNLLIKQTAHFNVVEPPPIIGGAGDDNLLGTRCADTIIGNAGDDNIDGREGSDTISGGEGHDHIVAGSGNDIVYAGAGNDIVFAGPGNDVVFGGAGNDRLFGEDGDDILFGEDGNDTLFGGAGADILIGDVGDDRLYGDAGNDTLDGGDGDDELDGGDGNDRMAGGDGDDTLAGAAGNDTLIDGLGADIVRGGTGNDYVVAAADGAPDDYSGDAGRDTLDYSAANTRIAVDLERGTADGDEIGHDTIAGFEEIIGGSGDDDLSAGADAVTIRGGSGDDLVSDGAGEDVVDAGAGDDRVLAAMDGADDRYDGGADCDTMDYSRATLRVNIDLGEETAEGIEIGKDLLANFERIIGGSGDDDFIAGSSSVSFTGGEGNDTFQFQRRDDDHQPDIVRKITDFSVGDRIIAATYEIYYRDEDAAADQVADLFEDIYLADQGDQRPVRFRFEKQDNDEFTIIEVQDRPDNDQDFYAIQLSGHHQLQFTVSVS GT:EXON 1|1-769:0| BL:SWS:NREP 2 BL:SWS:REP 301->408|RTX12_ACTPL|2e-18|47.7|107/1023| BL:SWS:REP 612->685|ALGE2_AZOVI|4e-06|34.5|71/997| PROS 326->344|PS00330|HEMOLYSIN_CALCIUM|PDOC00293| PROS 389->407|PS00330|HEMOLYSIN_CALCIUM|PDOC00293| PROS 416->434|PS00330|HEMOLYSIN_CALCIUM|PDOC00293| NREPEAT 2 REPEAT 3|315->347|351->383|387->419| REPEAT 2|500->560|599->659| SEG 143->196|pgapndnragnpgggggggggggggggggsgdrgsgndgplrppperppsvnpp| SEG 420->443|gdagndtldggdgddeldggdgnd| SEG 446->461|aggdgddtlagaagnd| SEG 537->550|ggsgdddlsagada| SEG 562->598|vsdgagedvvdagagddrvlaamdgaddrydggadcd| BL:PDB:NREP 2 BL:PDB:REP 306->416|2zj7A|4e-12|45.9|111/616| BL:PDB:REP 472->517|1mdaH|2e-04|41.3|46/368| RP:PDB:NREP 1 RP:PDB:REP 301->419|2agmA|2e-18|24.4|119/167| RP:PFM:NREP 3 RP:PFM:REP 57->121|PF06075|1e-04|30.8|65/591|DUF936| RP:PFM:REP 360->416|PF08548|7e-06|48.2|56/174|Peptidase_M10_C| RP:PFM:REP 637->667|PF02382|2e-04|45.2|31/623|RTX| HM:PFM:NREP 8 HM:PFM:REP 320->337|PF00353|0.00055|44.4|18/18|HemolysinCabind| HM:PFM:REP 338->354|PF00353|1.4e-05|47.1|17/18|HemolysinCabind| HM:PFM:REP 356->372|PF00353|3.2e-05|58.8|17/18|HemolysinCabind| HM:PFM:REP 374->391|PF00353|2.7e-07|61.1|18/18|HemolysinCabind| HM:PFM:REP 392->409|PF00353|5.5e-07|66.7|18/18|HemolysinCabind| HM:PFM:REP 411->427|PF00353|8.8e-06|70.6|17/18|HemolysinCabind| HM:PFM:REP 428->444|PF00353|0.00041|58.8|17/18|HemolysinCabind| HM:PFM:REP 447->463|PF00353|1.9e-05|76.5|17/18|HemolysinCabind| GO:PFM:NREP 7 GO:PFM GO:0004222|"GO:metalloendopeptidase activity"|PF08548|IPR013858| GO:PFM GO:0005509|"GO:calcium ion binding"|PF08548|IPR013858| GO:PFM GO:0005615|"GO:extracellular space"|PF08548|IPR013858| GO:PFM GO:0008270|"GO:zinc ion binding"|PF08548|IPR013858| GO:PFM GO:0005509|"GO:calcium ion binding"|PF02382|IPR018504| GO:PFM GO:0005576|"GO:extracellular region"|PF02382|IPR018504| GO:PFM GO:0009405|"GO:pathogenesis"|PF02382|IPR018504| RP:SCP:NREP 1 RP:SCP:REP 298->416|1af0A1|3e-08|23.5|119/225|b.80.7.1| HM:SCP:REP 145->349|1k7iA1|6.4e-09|39.0|105/221|b.80.7.1|1/4|beta-Roll| HM:SCP:REP 298->418|1satA1|1.8e-29|49.6|121/225|b.80.7.1|1/4|beta-Roll| HM:SCP:REP 381->482|1g9kA1|3.1e-23|60.8|102/219|b.80.7.1|2/4|beta-Roll| HM:SCP:REP 449->612|1kapP1|7.4e-16|39.4|155/224|b.80.7.1|3/4|beta-Roll| HM:SCP:REP 580->724|1g9kA1|1.4e-06|30.6|144/219|b.80.7.1|4/4|beta-Roll| OP:NHOMO 502 OP:NHOMOORG 184 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------1-----1--------1------------1--------------------------------------------354111-------------I541--7--114--3-5-3-178DS---1-1-1-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------411C-----1131-111--243----------1-65763A713----112149323961----5285245969------------161--------------------------------14-----1-1---1-------------------211-----41------11-1--6--1712--21122---1--------511-3--2--1----1-1------------1----------------------112--1----1-1111--21-111--21-3---1------------1----111-1-----1---------1-----------1--14--------------------------2-------------6------11----411--1--------------13-----45-----214121111-234---------------111143-11--1-------1111--3-------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------1-1--------------------------------------------1----3------1----------------1----------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 165 STR:RPRED 21.5 SQ:SECSTR ############################################################################################################################################################################################################################################################################################################EEEEccccEEEcccccccEEEEccccEEEccccccEEEEEccccEEEcccccccccccccccEEEEEcTTTcEEEcEEcTTccEEEEEEccccTTTcccccEEEEcccccccTTTcccT####################################################cEEEEEEcEEEEccccccEEEEEETTTTEEEEEcccEEEEcccccc############################################################################################################################################################################################################################################################ DISOP:02AL 1-27,52-84,125-125,141-197,768-770| PSIPRED ccccccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccHHHccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccEEEEEccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccEEEEEEEcccEEEEEEccccccccccccccEEEEEEccccccEEcccccEEEEccccccEEEEEEEEEEcccccEEEEEEEcccccccEEEcccccEEEEEcccccEEEccccccEEEcccccEEEEccccccEEEEccccEEEEccccccEEEcccccEEEEccccccEEEccccccEEEccccccEEEcccccEEEEEEccccEEEccccccccccccccccccccccccccccccccccEEccccccEEEccccccEEEccccccEEEEcccccccEEEcccccEEEEEcccccEEEEEccccEEEcccEEEEEEEccccEEcccccccccccccccEEEccccccEEccccccccccccccccEEEEEcccccccccccccccccccccccEEEEEEccccEEEEccccccEEEcccEEEccccccEEEccccccEEEcccccEEEEEcccccEEEcccccEEEEcccccEEEEEEccccccccccEEEccccccEEEEEEEcccEEEEEEEcccccccEEEEEEEccccccccccccEEEEEEEEEEEEEEcc //