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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38809.1
DDBJ      :             dTDP-4-dehydrorhamnose 3,5-epimerase
Swiss-Prot:             

Homologs  Archaea  37/68 : Bacteria  517/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
b.82.1
:185 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->177 1rtvA PDBj 7e-43 50.3 %
:RPS:PDB   2->178 2c0zA PDBj 1e-43 37.4 %
:RPS:SCOP  2->182 1nxmA  b.82.1.1 * 4e-56 32.6 %
:HMM:SCOP  1->184 1dzrA_ b.82.1.1 * 1.2e-72 53.3 %
:RPS:PFM   7->175 PF00908 * dTDP_sugar_isom 1e-54 59.0 %
:HMM:PFM   6->179 PF00908 * dTDP_sugar_isom 2.3e-72 54.3 173/177  
:BLT:SWISS 8->185 RFBC_RHISN 6e-50 54.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38809.1 GT:GENE ABE38809.1 GT:PRODUCT dTDP-4-dehydrorhamnose 3,5-epimerase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1765326..1765883 GB:FROM 1765326 GB:TO 1765883 GB:DIRECTION + GB:PRODUCT dTDP-4-dehydrorhamnose 3,5-epimerase GB:PROTEIN_ID ABE38809.1 GB:DB_XREF GI:91682507 InterPro:IPR000888 LENGTH 185 SQ:AASEQ MLTVTPSAIEAVKVIVPKSFADTRGTFCETYNHKRFVEHGISFEFVQDNQSFSAEAGTIRGLHFQSPPAAQDKLVRVLRGRILDVAVDLRRSSPTFGKWVAEELSAENGKQLLVPVGFAHGFCTLEPDTHVLYKVTSYYSPAHDLGVAWDDPDLAIDWPIRSDEAVLSDKDLRQPSFRSLAPVFE GT:EXON 1|1-185:0| BL:SWS:NREP 1 BL:SWS:REP 8->185|RFBC_RHISN|6e-50|54.2|177/195| BL:PDB:NREP 1 BL:PDB:REP 2->177|1rtvA|7e-43|50.3|173/184| RP:PDB:NREP 1 RP:PDB:REP 2->178|2c0zA|1e-43|37.4|174/199| RP:PFM:NREP 1 RP:PFM:REP 7->175|PF00908|1e-54|59.0|166/172|dTDP_sugar_isom| HM:PFM:NREP 1 HM:PFM:REP 6->179|PF00908|2.3e-72|54.3|173/177|dTDP_sugar_isom| GO:PFM:NREP 2 GO:PFM GO:0008830|"GO:dTDP-4-dehydrorhamnose 3,5-epimerase activity"|PF00908|IPR000888| GO:PFM GO:0009103|"GO:lipopolysaccharide biosynthetic process"|PF00908|IPR000888| RP:SCP:NREP 1 RP:SCP:REP 2->182|1nxmA|4e-56|32.6|172/194|b.82.1.1| HM:SCP:REP 1->184|1dzrA_|1.2e-72|53.3|182/183|b.82.1.1|1/1|RmlC-like cupins| OP:NHOMO 716 OP:NHOMOORG 562 OP:PATTERN 11----111111212111-1--1---------111--1-1-1-1-1-111111-1-1--111-11--- 1--1111111111111211-1111121111112111112212231111-1112111--1121--212112-1111-111-1-1-2-11243211111--11111111111--------------11111131111211111---1-2112222--22111-11-2132221-1-1-1-111-2-----1-1---11111111111111111----111----------1---2--------------------1---12111-111--32-1-1-1------------------------------------------1----1--12111---12-3-----12-1-2---1--1-221-------1---11---2112-----11-2231212111--11-111112-32233222112112231132322222211111212211-1111111131111231-------------------------------12--111111121221111111311-111112421211122111111111112111111111-112221111111-1221-311111111---1---2211-11-111----1-1-2--------------11121112---2-11221122221122111221---11-2--------11-1-1---11-111--11-----1--1-11111-2--1----1-11111111-1111--111111---1---------------111111111111-11--1-----------------111-21111111211212312111--------1311-------11-111121221111111--22--1111----------------------------------------11--1-11- -------------1----------------------------------------------------------------------------------------------1-2------------------------------------------------------------112----1---------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 185 STR:RPRED 100.0 SQ:SECSTR ccEEEEcccTTEEEEEcEEEEETTEEEEEcccHHHHHHHcccccccEEEEEEEEETTcEEEEEEEcTTTcccEEEEEEEcEEEEEEEEcccTcTTTTcEEEEEEETTTccEEEEcTTEEEEEEEcccEEEEEEEEcccccTTTEEEccTTcTTTccccccccccccccHHHHTcccHHTHccccc PSIPRED ccEEEEcccccEEEEcccEEcccccEEEEEEcHHHHHHccccccEEEEEEEEEcccccEEEEEEcccccccccEEEEEEEEEEEEEEEcccccccccEEEEEEEcccccEEEEEccccEEEEEEccccEEEEEccccccccHHccccccccccccccccccccccEEcHHHHccccHHHHccccc //