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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38814.1
DDBJ      :             ABC transporter related
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  905/915 : Eukaryota  192/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:249 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   5->246 1g6hA PDBj 2e-32 31.8 %
:RPS:PDB   5->246 2d3wB PDBj 5e-40 19.1 %
:RPS:SCOP  1->245 1ji0A  c.37.1.12 * 6e-43 28.9 %
:HMM:SCOP  4->250 1g6hA_ c.37.1.12 * 7.2e-58 35.2 %
:RPS:PFM   44->176 PF00005 * ABC_tran 8e-09 34.2 %
:RPS:PFM   223->245 PF12399 * BCA_ABC_TP_C 2e-04 78.3 %
:HMM:PFM   44->176 PF00005 * ABC_tran 1.9e-16 24.8 117/118  
:HMM:PFM   223->245 PF12399 * BCA_ABC_TP_C 6.9e-15 69.6 23/23  
:HMM:PFM   18->54 PF03193 * DUF258 0.0002 19.4 36/161  
:BLT:SWISS 5->246 BRAF_PSEAE 2e-44 42.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38814.1 GT:GENE ABE38814.1 GT:PRODUCT ABC transporter related GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(1770541..1771290) GB:FROM 1770541 GB:TO 1771290 GB:DIRECTION - GB:PRODUCT ABC transporter related GB:PROTEIN_ID ABE38814.1 GB:DB_XREF GI:91682512 InterPro:IPR001687 InterPro:IPR003439 InterPro:IPR003593 LENGTH 249 SQ:AASEQ MSNAIELRGVEKSFGITKVIQNISLSIAQGERHALIGPNGAGKSTTFNLISGYMRPTSGSILLRGEEISGLRPFQINRRGLSRSFQVTNVFTNMTVWENLRCAVLWATGHRYAFWKNVDKLPEVRERTAQILEDIHLTSRRDMPAGLLTYAEQRALEIGITIAGGANVILLDEPTAGMSHAETERAVALIRRLTEGRTLLIVEHDMSVVFGLADRISVLVYGQVIASGTPEEIRGNPKVKEAYLGEEAA GT:EXON 1|1-249:0| BL:SWS:NREP 1 BL:SWS:REP 5->246|BRAF_PSEAE|2e-44|42.2|237/255| BL:PDB:NREP 1 BL:PDB:REP 5->246|1g6hA|2e-32|31.8|242/254| RP:PDB:NREP 1 RP:PDB:REP 5->246|2d3wB|5e-40|19.1|241/244| RP:PFM:NREP 2 RP:PFM:REP 44->176|PF00005|8e-09|34.2|117/123|ABC_tran| RP:PFM:REP 223->245|PF12399|2e-04|78.3|23/23|BCA_ABC_TP_C| HM:PFM:NREP 3 HM:PFM:REP 44->176|PF00005|1.9e-16|24.8|117/118|ABC_tran| HM:PFM:REP 223->245|PF12399|6.9e-15|69.6|23/23|BCA_ABC_TP_C| HM:PFM:REP 18->54|PF03193|0.0002|19.4|36/161|DUF258| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 1 RP:SCP:REP 1->245|1ji0A|6e-43|28.9|235/240|c.37.1.12| HM:SCP:REP 4->250|1g6hA_|7.2e-58|35.2|247/254|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 38410 OP:NHOMOORG 1165 OP:PATTERN PPD8HICGMMLKMEOGbAOMJNMamJMShIXRH8CDDAHEED8QSLVZHIuhZ7HRIPUKIGF7P175 MQfM*XOYddePTQZLNLK-Kb99W*LLLLLMjhiin***P*S*dphdkbUNwtpDNZBBjk*V*hr***XTQQQmURSJyae8586ANMLE3HDIE--ADKHIHUEREL55665657766666DPOFLNJFROUMaggnyFGHsWfaliUUcWYQQIBEFGCdXWYtvzSEPECCCDMCFDDbWYWTfZ8QZn********u*******vppnq***Yku*uehnqqlmp**QYYYYYXVXXXXYXXTTQPRoVQVlmUKSMXliIJqpVUJTbTabahfjlhckikkhkhidcjlfigUVUUTVVVWVUUUmfgWUXiikid*lz********X*Zj*vvVXYV*aeeb*WeQI**faXYidNUgVjfNOUVIaQNOIGIBEISQ***TOl****************-bi*dT*e***L6**************GIHr*******x*FFFFFFFFvTXDMdPx55445333334433444434554476564IA7A7Ay**********ssrsn*****wyyh********9Luuq*boem******SfZEPDKaJEEFEDEDQJKVcgTx*MVQsbOffUThFYRUONTZNSYWUWklR*FEDLCCCDECB476677566AOA7EFEaarGkPOHNEkMNPPPHMYNLMNQLVSQTU5-CDOGJ---111*k**Nzkloonmpmpkm-omkooknonnpomkkkkke*****aaOfebbeeefecbbebbc*eaXhhgiL2*******y****23EBBDABCHHKGKGrh*USUSRRDIKIHNKPUHJKJJEQEINgSlljil*y*irxmld***A99799989FZefojjkkjlvorqIHGGHGGBDCA99922FLGGDECD76676776uBL88638-6A768D89A977797A224TdjMQZsbcXCXL --11TVC-OE4CJPE97BA88A7C5B8A95757CFA8876788445779CDBJF88D86857821232-13224523-3332112-23-8A47A374454317A461BISOIJJUIQFD75DLFgd6dA**Y3YKaGGD7UCCTJ8HBBCSA7*APLHf8HoCNHN8jOS*ITJBB874v3866BSHIo8WOC7aPVVA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 247-250| PSIPRED cccEEEEEcEEEEEccEEEEcccEEEEccccEEEEEccccccHHHHHHHHHccccccccEEEEccEEcccccHHHHHHcccccccccccccccccHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHcccHHHcccccccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHccEEEEEEccEEEEEccHHHHHccHHHHHHHcccccc //