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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38828.1
DDBJ      :             Methionine synthase, vitamin-B12 independent
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  108/915 : Eukaryota  46/199 : Viruses  0/175   --->[See Alignment]
c.1.22
:372 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->371 1ypxA PDBj 3e-87 57.7 %
:RPS:PDB   7->370 3bq6B PDBj 4e-42 18.0 %
:RPS:SCOP  10->371 1u1hA1  c.1.22.2 * 4e-50 16.0 %
:HMM:SCOP  7->372 1u1jA2 c.1.22.2 * 3.3e-81 30.3 %
:RPS:PFM   13->343 PF01717 * Meth_synt_2 4e-38 37.8 %
:HMM:PFM   13->367 PF01717 * Meth_synt_2 1.3e-17 23.7 317/324  
:BLT:SWISS 1->370 YXJG_BACSU e-117 54.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38828.1 GT:GENE ABE38828.1 GT:PRODUCT Methionine synthase, vitamin-B12 independent GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1784916..1786034 GB:FROM 1784916 GB:TO 1786034 GB:DIRECTION + GB:PRODUCT Methionine synthase, vitamin-B12 independent GB:PROTEIN_ID ABE38828.1 GB:DB_XREF GI:91682526 InterPro:IPR002629 LENGTH 372 SQ:AASEQ MQRTKAPFRADEVGSLLRPQSIKDARARLEKGEISAADLRRIEDMEIEKIVHKQSAIGLKLATDGEFRRSWWHFDFLSHLTGCELYHPDTGIQFAGVQTRNDSIRVIGKLDFPDDHPMLEHFRFLKRHADIAHVTAKMTIPSPAVLHFRGGRKAISSEVYPDLDGFFEDLARTYRKAVKAFYDAGCRYLQFDDTVWAYLCSQDELQKARERGDNPDNLQQIYSRVINYAIAERPSDMVITTHVCRGNFRSTWISSGGYEPVAETLLAGINYDGYFLEYDSERAGGFEPLRFLPKGNKVVVVGVITSKFGELEKKDDIKRRLDEAAKFAPLAQLALSPQCGFASTEEGNILSEQEQWDKLRLAVEVAQDVWGR GT:EXON 1|1-372:0| BL:SWS:NREP 1 BL:SWS:REP 1->370|YXJG_BACSU|e-117|54.8|365/378| BL:PDB:NREP 1 BL:PDB:REP 6->371|1ypxA|3e-87|57.7|310/315| RP:PDB:NREP 1 RP:PDB:REP 7->370|3bq6B|4e-42|18.0|327/718| RP:PFM:NREP 1 RP:PFM:REP 13->343|PF01717|4e-38|37.8|299/323|Meth_synt_2| HM:PFM:NREP 1 HM:PFM:REP 13->367|PF01717|1.3e-17|23.7|317/324|Meth_synt_2| GO:PFM:NREP 2 GO:PFM GO:0003871|"GO:5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity"|PF01717|IPR002629| GO:PFM GO:0009086|"GO:methionine biosynthetic process"|PF01717|IPR002629| RP:SCP:NREP 1 RP:SCP:REP 10->371|1u1hA1|4e-50|16.0|332/394|c.1.22.2| HM:SCP:REP 7->372|1u1jA2|3.3e-81|30.3|330/0|c.1.22.2|1/1|UROD/MetE-like| OP:NHOMO 225 OP:NHOMOORG 158 OP:PATTERN ---------------1-1------1----1-------------------------------------- --1--------------------------------------------------------------11----1------1---2-----11------------------------------2222---------------11----1---------------------------------------------1-1---------------1-1112-------1--111111--1--------------1--11111111121-1222211-11222111-------111------------------------11133-111-----2------------22-------12-11--1---------------1--------------111--111111--------------------1------------------------------------------------------------------------------------------------------------------------------1-1-----------------------------------------------------------1-----------------------------------------------------------------1132-11------------------------------11111-------------------1-------------------------------------1-2222-1--------------------------------------------------------------------------------------------------------------------------------------- -------------1-532211111313----------11111111122112222--222222---------------------------38-3121----2-1-------1------------------------------------------------------------------------------2--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 357 STR:RPRED 96.0 SQ:SECSTR #####ccccccccccccccHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHTccccccccTTcccTTHHHHTTcEEEEccccccEEEETTEEEcccEccEEEEEEcccccccHHHHHHHHTTccTTTccccEEEEcHHHHHHTcEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHTTccEEEEEcTHHHHTccHHHHHHHHccGGGHHHHHHHHHHHHHHHTcccTTTcEEEEEcccccc#######cccTTTHHHHTTTccccEEEEccTTTTTGGGHHHHTcTTcccEEEEEcccTTccccccHHHHHHHHHHHTTTccGGGEEEEcccccTTcccc##ccHHHHHHHHHHHHHHHHHHHc# DISOP:02AL 1-2| PSIPRED ccccccccccEEcccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccEEEccEEccccHHHHHHHccccEEEEEcccEEEEEcccccccccEEEEEEcccccccHHHHHHHHHHHccccccEEEEEEcccEEEEEEccccccccHHcccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHcccccccccHHccccHHHHHHHHHHHHHHHHcccccccEEEEEEEEccccccccccccccHHHHHHHHHHcccEEEEEEccccccccHHHHHccccccEEEEEEEEccccccccHHHHHHHHHHHHHcccHHHEEEccccccccccccccccHHHHHHHHHHHHHHHHHHccc //