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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38862.1
DDBJ      :             cytochrome c, class II
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  19/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.24.3
:149 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->149 1s05A PDBj 1e-61 84.5 %
:RPS:PDB   21->147 1a7vA PDBj 2e-23 39.8 %
:RPS:SCOP  21->147 1a7vA  a.24.3.2 * 5e-25 39.8 %
:HMM:SCOP  17->146 1e85A_ a.24.3.2 * 5.7e-34 39.0 %
:RPS:PFM   29->145 PF01322 * Cytochrom_C_2 6e-13 45.5 %
:HMM:PFM   22->145 PF01322 * Cytochrom_C_2 1.3e-34 41.7 120/122  
:BLT:SWISS 1->149 C556_RHOPA 1e-61 75.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38862.1 GT:GENE ABE38862.1 GT:PRODUCT cytochrome c, class II GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 1824321..1824770 GB:FROM 1824321 GB:TO 1824770 GB:DIRECTION + GB:PRODUCT cytochrome c, class II GB:PROTEIN_ID ABE38862.1 GB:DB_XREF GI:91682560 InterPro:IPR002321 LENGTH 149 SQ:AASEQ MLRTVVVAGALLLSVSAVVAQQDIVDKTQKLMKDNGRNAMLLGAMAKGDKPYDQAAVDAALKQFDETAKELPKLFPASVKGLKAFDSKYSSSPKIWDERAKFDAEIADFAKAVNAAQGKIKDVDTLKASFQPIGKQCGSCHETFRLKDG GT:EXON 1|1-149:0| BL:SWS:NREP 1 BL:SWS:REP 1->149|C556_RHOPA|1e-61|75.8|149/149| TM:NTM 1 TM:REGION 3->25| SEG 5->20|vvvagalllsvsavva| BL:PDB:NREP 1 BL:PDB:REP 21->149|1s05A|1e-61|84.5|129/129| RP:PDB:NREP 1 RP:PDB:REP 21->147|1a7vA|2e-23|39.8|123/125| RP:PFM:NREP 1 RP:PFM:REP 29->145|PF01322|6e-13|45.5|112/121|Cytochrom_C_2| HM:PFM:NREP 1 HM:PFM:REP 22->145|PF01322|1.3e-34|41.7|120/122|Cytochrom_C_2| GO:PFM:NREP 4 GO:PFM GO:0005506|"GO:iron ion binding"|PF01322|IPR012127| GO:PFM GO:0009055|"GO:electron carrier activity"|PF01322|IPR012127| GO:PFM GO:0020037|"GO:heme binding"|PF01322|IPR012127| GO:PFM GO:0042597|"GO:periplasmic space"|PF01322|IPR012127| RP:SCP:NREP 1 RP:SCP:REP 21->147|1a7vA|5e-25|39.8|123/125|a.24.3.2| HM:SCP:REP 17->146|1e85A_|5.7e-34|39.0|123/0|a.24.3.2|1/1|Cytochromes| OP:NHOMO 21 OP:NHOMOORG 19 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111---21112----------1---1----------111--1---111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 129 STR:RPRED 86.6 SQ:SECSTR ####################cccHHHHHHHHHHHHHHHHHHHHHHHTTcccccHHHHHHHHHHHHHHHHHGGGGccGGGccTTcTcccccccTHHHHcHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccc DISOP:02AL 1-1,147-150| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccc //