[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38881.1
DDBJ      :             thioesterase superfamily
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  89/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.38.1
:151 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   19->128 2fujA PDBj 5e-11 30.9 %
:RPS:PDB   17->143 3ck1A PDBj 1e-20 18.1 %
:RPS:SCOP  24->142 2oiwA1  d.38.1.1 * 2e-29 22.7 %
:HMM:SCOP  13->147 2cyeA1 d.38.1.1 * 9.5e-34 33.3 %
:RPS:PFM   10->43 PF01643 * Acyl-ACP_TE 3e-04 50.0 %
:HMM:PFM   32->109 PF03061 * 4HBT 2.5e-14 23.0 74/79  
:BLT:SWISS 17->122 Y1494_AQUAE 2e-07 28.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38881.1 GT:GENE ABE38881.1 GT:PRODUCT thioesterase superfamily GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(1852095..1852550) GB:FROM 1852095 GB:TO 1852550 GB:DIRECTION - GB:PRODUCT thioesterase superfamily GB:PROTEIN_ID ABE38881.1 GB:DB_XREF GI:91682579 InterPro:IPR006683 LENGTH 151 SQ:AASEQ MTARSRDHALPRLEDFPYRLSDNVRFADLDPNNHVNNAVYASYFETARVTLMKDPASGLIPPGLSWVLVRLDIHFRSELHWPGTIELGIGLVKLGRTSTHFDQVVFSEGVCVASARAVTVLVDAQSRKPTPLTDDLIASLAPWWRRGVEHE GT:EXON 1|1-151:0| BL:SWS:NREP 1 BL:SWS:REP 17->122|Y1494_AQUAE|2e-07|28.3|106/128| BL:PDB:NREP 1 BL:PDB:REP 19->128|2fujA|5e-11|30.9|110/118| RP:PDB:NREP 1 RP:PDB:REP 17->143|3ck1A|1e-20|18.1|127/138| RP:PFM:NREP 1 RP:PFM:REP 10->43|PF01643|3e-04|50.0|34/229|Acyl-ACP_TE| HM:PFM:NREP 1 HM:PFM:REP 32->109|PF03061|2.5e-14|23.0|74/79|4HBT| RP:SCP:NREP 1 RP:SCP:REP 24->142|2oiwA1|2e-29|22.7|119/131|d.38.1.1| HM:SCP:REP 13->147|2cyeA1|9.5e-34|33.3|132/0|d.38.1.1|1/1|Thioesterase/thiol ester dehydrase-isomerase| OP:NHOMO 108 OP:NHOMOORG 95 OP:PATTERN -------------------------11---1------------------11----------------- -----1--------11111-11---111111-----1122-1------------------------------------------------------------------1---------------------------111--------------------------------------------121-----1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----11111---1-111-------------121121-----------------12--11---------------------121----------------------------------1--11--111111--------1------1-11-----22---------22--------1---------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------1------------------1111111-----------1--1-1-------------------------------1111-111-----------------------11-------------------------------------- ------------------------------------------------------------------------------------------3------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 143 STR:RPRED 94.7 SQ:SECSTR ###EccccccccGGGccEEEEEEccGGGccTTccccHHHHHHHHHHHHHHHHHTcHHHHTTTcEEccEEEEEEEEcccccTTcEEEEEEEEEEEcccEEEEEEEEcTTccEEEEEEEEEEcEEETTEEEccccHHHHHHHTTcHTc##### DISOP:02AL 1-13,146-152| PSIPRED ccccccccccccHHccEEEEEEEEEEHHccccccEEHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEEEEEEccccccEEEEEEEEEEEcccEEEEEEEEEEccEEEEEEEEEEEEEEccccccccccHHHHHHHHHHHHHccccc //