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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38884.1
DDBJ      :             GDP-mannose 4,6-dehydratase
Swiss-Prot:             

Homologs  Archaea  29/68 : Bacteria  513/915 : Eukaryota  108/199 : Viruses  2/175   --->[See Alignment]
c.2.1
:328 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->323 1rpnC PDBj e-104 58.1 %
:RPS:PDB   3->316 2c29D PDBj 6e-33 16.3 %
:RPS:SCOP  1->320 1bxkA  c.2.1.2 * 4e-49 22.7 %
:HMM:SCOP  3->322 1rpnA_ c.2.1.2 * 3.1e-72 33.6 %
:RPS:PFM   7->185 PF01370 * Epimerase 2e-19 39.2 %
:HMM:PFM   6->247 PF01370 * Epimerase 2.5e-61 36.8 234/238  
:BLT:SWISS 1->323 GM4D_PSEAE e-104 58.3 %
:PROS 139->167|PS00061|ADH_SHORT
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38884.1 GT:GENE ABE38884.1 GT:PRODUCT GDP-mannose 4,6-dehydratase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(1854824..1855810) GB:FROM 1854824 GB:TO 1855810 GB:DIRECTION - GB:PRODUCT GDP-mannose 4,6-dehydratase GB:PROTEIN_ID ABE38884.1 GB:DB_XREF GI:91682582 InterPro:IPR001509 InterPro:IPR002198 InterPro:IPR006368 LENGTH 328 SQ:AASEQ MSKIAFITGITGQDGAYLASLLLEQGYAVHGLLRRSASADGMVSRLKWLGVADRVTLHDGNLTDLSSLIRVLGDVRPHEVYNLAAQSFVKSSWQQPLLTGTVTGLGAVNALEAVRTACPEARFYQASSSEMFGMIQEPVQSETTPFYPRSPYAAAKLYAHWMTINYRESFGMHASCGILFNHESPLRGIEFVTRKITDGVARIKLGLQQQLVLGNLDAKRDWGHARDYTRAMWLMLQQDRPDDYVIATGRAASVREFCEMAFACVGLDMNDHVVTDPRFLRPAEVDVLKGDASKAKQKLGWQFETPLERLIEEMVEADLARLTAGGRA GT:EXON 1|1-328:0| BL:SWS:NREP 1 BL:SWS:REP 1->323|GM4D_PSEAE|e-104|58.3|321/323| PROS 139->167|PS00061|ADH_SHORT|PDOC00060| SEG 205->216|lglqqqlvlgnl| BL:PDB:NREP 1 BL:PDB:REP 2->323|1rpnC|e-104|58.1|320/322| RP:PDB:NREP 1 RP:PDB:REP 3->316|2c29D|6e-33|16.3|301/324| RP:PFM:NREP 1 RP:PFM:REP 7->185|PF01370|2e-19|39.2|171/232|Epimerase| HM:PFM:NREP 1 HM:PFM:REP 6->247|PF01370|2.5e-61|36.8|234/238|Epimerase| GO:PFM:NREP 3 GO:PFM GO:0003824|"GO:catalytic activity"|PF01370|IPR001509| GO:PFM GO:0044237|"GO:cellular metabolic process"|PF01370|IPR001509| GO:PFM GO:0050662|"GO:coenzyme binding"|PF01370|IPR001509| RP:SCP:NREP 1 RP:SCP:REP 1->320|1bxkA|4e-49|22.7|313/341|c.2.1.2| HM:SCP:REP 3->322|1rpnA_|3.1e-72|33.6|318/321|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 1139 OP:NHOMOORG 652 OP:PATTERN 11----1-1------------1113-------122--2-11--2331311211---1--11--1---1 2133-112222---21233-312231444442-1-1122214331-1--2212--112----3--1-2-2---------1--2112113214-211----11122212-1-----------------1-112231-33335---4332432231111111111131232221-12111-22-21-1-------1111112111111111----1-111-1-12-1---1--34--------------------------------2---------1---1-11111111-11-11-11-1111111111111111111111111--1-11121221111-111---1-3--1------3411-----------242-231-----1143112-3-12311221222221---3--232-23-1111321233--2-1112122-1112-222222222--22323-----------------------------21-1---221-4441233222211442222122262111-113-21--1-11211---112--1--------1--11---21-33231311122442271322122222-----121-2-1111111111-112551-1--11---2--1--1----------------1--1------112--1-122111111--2112121111211-11112--1-1---2133323222132331-12-11111-2-11233-3222----22222----1-1---------------------------1-2231-221-3-13-2341--------2----11111----1122343322233331-31112233----------------------------------------------142 11--111-1-1---1-----1----------------1-11----------1-1-----------------------------------121-111---111-223--53421112-111111112121241-1111111111211111-1-11112212511211111131612---1Q211-14135-311143433 -----------------------1---------------------------------------------------------------------------------------------------------------------------------------------------1--- STR:NPRED 325 STR:RPRED 99.1 SQ:SECSTR cccEEEETTTTcHHHHHHHHHHHHTTcEEEEEEccTTcHHHHHHHHTcTTHHHHEEEEEccTTcTTTTHHHHHHHTTccEEEEcccccccccccHHHHTHHHHHHHHHHHHHHHHHHccccEEEEEccGGEcTTccccHHHHHHHccTTHHHHHHHHHHHHHHHHHHHHHTccEEEEEEcEEEcccccccccHHHHHHTHHHHTHHHHHcGGGHHHHTEEEEEEHHHHHHHHHHHHHcTTccEEEEEccEEEEHHHHHHHHHHHHTHHHcTTcccccccTTccTTccccEEccHHHHHHTccccccHHHHHHHHHHccccTTccH### DISOP:02AL 326-329| PSIPRED cccEEEEEccccHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccccHHHHHHHHHHHHHHccHHHHEEccccccccccHHHHHHHHHHHHHHcccccEEEEccccEEEHHHHHHHHHHHHccccccEEEEccccccccccccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccc //