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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38897.1
DDBJ      :             UspA
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  151/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.26.2
:143 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->140 3fdxA PDBj 1e-16 40.7 %
:RPS:PDB   1->143 2dumC PDBj 9e-20 25.2 %
:RPS:SCOP  1->140 1mjhA  c.26.2.4 * 1e-23 23.4 %
:HMM:SCOP  2->142 2gm3A1 c.26.2.4 * 1.8e-29 34.0 %
:RPS:PFM   3->140 PF00582 * Usp 2e-07 38.2 %
:HMM:PFM   1->140 PF00582 * Usp 1.6e-29 29.7 138/140  
:BLT:SWISS 1->140 USPG_SALTY 4e-18 36.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38897.1 GT:GENE ABE38897.1 GT:PRODUCT UspA GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(1870279..1870710) GB:FROM 1870279 GB:TO 1870710 GB:DIRECTION - GB:PRODUCT UspA GB:PROTEIN_ID ABE38897.1 GB:DB_XREF GI:91682595 InterPro:IPR006015 InterPro:IPR006016 LENGTH 143 SQ:AASEQ MFRSILVPIDLADTALARPAIETAATLARTYDGTVRLLHVISITPVVLAEYVPADFDAQQRRDAEAALAEVAQNSGIEPSRRSTKVRQGGIYHEIIEEVAAIKADLIVMSSHRPAMRSYFLGSNAGHVVRYAPCSVLVVRDNK GT:EXON 1|1-143:0| BL:SWS:NREP 1 BL:SWS:REP 1->140|USPG_SALTY|4e-18|36.0|139/142| BL:PDB:NREP 1 BL:PDB:REP 4->140|3fdxA|1e-16|40.7|123/125| RP:PDB:NREP 1 RP:PDB:REP 1->143|2dumC|9e-20|25.2|139/146| RP:PFM:NREP 1 RP:PFM:REP 3->140|PF00582|2e-07|38.2|131/139|Usp| HM:PFM:NREP 1 HM:PFM:REP 1->140|PF00582|1.6e-29|29.7|138/140|Usp| GO:PFM:NREP 1 GO:PFM GO:0006950|"GO:response to stress"|PF00582|IPR006016| RP:SCP:NREP 1 RP:SCP:REP 1->140|1mjhA|1e-23|23.4|137/143|c.26.2.4| HM:SCP:REP 2->142|2gm3A1|1.8e-29|34.0|141/0|c.26.2.4|1/1|Adenine nucleotide alpha hydrolases-like| OP:NHOMO 233 OP:NHOMOORG 153 OP:PATTERN ------------------------1---------------------------------------1--- ------------------------------------------------------------------------------------------------------------1------------------1-----11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111--11111--------------------1----111111-1111-----41-1-11111---------------1------------1111111111111-------------------------------------------------------2-------------------------------1-----------1----1-------1---------------------------11--------1--------------------------------311144-2222222222-223222222222222222245411224222222222222222212222222-------------------1--1------------------------11111-1----------------------111-11111-11111111111111------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 143 STR:RPRED 100.0 SQ:SECSTR cccEEEEEccccHHHHHHHHHHHHHHHccccccEEEEEEEEEGGGTccccGGGGGGTHHHHHHHHHHHHHHHHHTTccEEEEEEEEEEEcHHHHHHHHHHHHTccEEEEEcccccccTTcccHHHHHHHHHccccEEEEcccc DISOP:02AL 142-144| PSIPRED cccEEEEEEccccHHHHHHHHHHHHHHHHHcccEEEEEEEEccccHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEccHHHHHHHHHHHHcccEEEEccccccHHHHcccHHHHHHHHHccccEEEEEccc //