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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38973.1
DDBJ      :             isocitrate dehydrogenase (NADP)
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  168/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
c.77.1
:407 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->402 1lwdA PDBj e-162 68.0 %
:RPS:PDB   3->402 2cmjB PDBj 3e-96 65.7 %
:RPS:SCOP  1->402 1lwdA  c.77.1.1 * e-108 67.4 %
:HMM:SCOP  1->405 1lwdA_ c.77.1.1 * 1.1e-149 43.0 %
:RPS:PFM   15->382 PF00180 * Iso_dh 5e-21 34.3 %
:HMM:PFM   5->394 PF00180 * Iso_dh 4.7e-74 25.9 343/347  
:BLT:SWISS 1->398 IDH_SPHYA e-173 71.9 %
:PROS 269->288|PS00470|IDH_IMDH

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38973.1 GT:GENE ABE38973.1 GT:PRODUCT isocitrate dehydrogenase (NADP) GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(1953739..1954962) GB:FROM 1953739 GB:TO 1954962 GB:DIRECTION - GB:PRODUCT isocitrate dehydrogenase (NADP) GB:PROTEIN_ID ABE38973.1 GB:DB_XREF GI:91682671 InterPro:IPR001804 InterPro:IPR004790 LENGTH 407 SQ:AASEQ MAKIKVTNPVVELDGDEMTRIIWQMIKDKLITPFLDVELMYFDLGMEHRDKTDDQVTIDAANAIKQVGVGVKCATITPDEARVKEFGLKSMWKSPNGTIRNILGGVIFREPIICKNVPRLVPGWTKPIVIGRHAYGDQYRATDIKFPGPGTLTMKFVGEDGSVIEREVFKAPGAGVAMSMYNLDESIKDFARASLNYGLIRNYPVYLSTKNTIMKVYDGRFKDIFQEIFDAEFKAEYDSKGLTYEHRLIDDMVASALKWSGGYVWACKNYDGDVQSDTVAQGYGSLGLMTSVLMTPDGKTVEAEAAHGTVTRHYREHQKGKATSTNSIASIFAWTRGLAHRAKLDSNEELARFADMLERVCVETVEAGAMTKDLALLVGADQRWLSTEGFLDKVAQNLHKAINEPAA GT:EXON 1|1-407:0| BL:SWS:NREP 1 BL:SWS:REP 1->398|IDH_SPHYA|e-173|71.9|398/406| PROS 269->288|PS00470|IDH_IMDH|PDOC00389| BL:PDB:NREP 1 BL:PDB:REP 3->402|1lwdA|e-162|68.0|400/413| RP:PDB:NREP 1 RP:PDB:REP 3->402|2cmjB|3e-96|65.7|399/409| RP:PFM:NREP 1 RP:PFM:REP 15->382|PF00180|5e-21|34.3|312/338|Iso_dh| HM:PFM:NREP 1 HM:PFM:REP 5->394|PF00180|4.7e-74|25.9|343/347|Iso_dh| GO:PFM:NREP 4 GO:PFM GO:0000287|"GO:magnesium ion binding"|PF00180|IPR001804| GO:PFM GO:0016616|"GO:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"|PF00180|IPR001804| GO:PFM GO:0051287|"GO:NAD or NADH binding"|PF00180|IPR001804| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00180|IPR001804| RP:SCP:NREP 1 RP:SCP:REP 1->402|1lwdA|e-108|67.4|402/413|c.77.1.1| HM:SCP:REP 1->405|1lwdA_|1.1e-149|43.0|405/413|c.77.1.1|1/1|Isocitrate/Isopropylmalate dehydrogenase-like| OP:NHOMO 559 OP:NHOMOORG 358 OP:PATTERN -------------------------------------------------------------------- ----1----------1111-1---1-11111-----11111---11--1111-----1--11--111---11111111--11--------------------1--111------------------------------------1---1-----------------1---------------------11-1---------------------------------------------------------------------------------------------------------------------------------------1-------1-11-11------1--111--1111------111----1--111111111211111111111111111111111-1111111111111111-111111111111-1122221--11111111111-11-1-----------------------------11111------------------------------------------------------------------------1---1-----------------1-------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111-----------------------------------------1-111--- 12--22--312-1111111111111111111111111111111111111111111111111112222212332222323322222211-12511112111111212-3-14383333222223243352BK2-224121242223123212222212222232222294262222111172121124451321122211 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 405 STR:RPRED 99.5 SQ:SECSTR ccccEcEEEEEEEEccHHHHHHHHHHHHHHTTTTcEEEEEEEEccHHHHHHTTTHHHHHHHHHHHHHcEEEEcccccccHHHHHHHTcccccccHHHHHHHHHccEEEEEEcccTTcccccTTccccEEEEEEcccGGGGcEEEEEcccEEEEEEEccTTccEEEEEEEEccccEEEEEccccHHHHHHHHHHHHHHHHHHTccEEEEEcTTTcTTHHHHHHHHHHHHHHHHTHHHHHHTTccEEEEEHHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHHHTcTTcEEEEEEcTTcccEEEEccccccHHHHHHHHTTcccccccHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHcGGGcccHHHHHHHHHHHHHHHHccc## DISOP:02AL 1-1,405-408| PSIPRED cccEEEcccEEEcccccccHHHHHHHHHHHccccccEEEEEEEccHHHHHHccccccHHHHHHHHHccEEEEccccccccccccccccccccccHHHHHHHHcccEEEEEEEEEcccccccccccccEEEEEEcccccEEcccEEEcccccEEEEEEcccccEEEEEEEEcccccEEEEEEEHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHccccccEEEHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHcHHHHHHHHHccccccEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccccHHHHHHHHHHHHHHHHccccc //