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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39046.1
DDBJ      :             acriflavin resistance protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  664/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
c.55.1d.225.1d.58.44f.35.1
:1034 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->1005 2v50B PDBj e-135 31.4 %
:RPS:PDB   3->978 3d9bA PDBj e-175 23.9 %
:RPS:SCOP  61->203 1mwkA2  c.55.1.1 * 6e-30 15.7 %
:RPS:SCOP  227->323 1iwgA2  d.58.44.1 * 5e-18 20.6 %
:RPS:SCOP  314->490 1iwgA7  f.35.1.1 * 4e-33 40.1 %
:RPS:SCOP  553->644 1iwgA3  d.58.44.1 * 5e-15 26.1 %
:RPS:SCOP  699->785 1iwgA6  d.225.1.1 * 2e-22 31.0 %
:RPS:SCOP  791->1003 1iwgA8  f.35.1.1 * 3e-29 33.0 %
:HMM:SCOP  40->135 1iwgA1 d.58.44.1 * 1.4e-24 39.6 %
:HMM:SCOP  134->323 1iwgA2 d.58.44.1 * 2.1e-21 27.6 %
:HMM:SCOP  289->490 1iwgA7 f.35.1.1 * 1.3e-47 38.2 %
:HMM:SCOP  553->650 1iwgA3 d.58.44.1 * 5.2e-20 32.7 %
:HMM:SCOP  649->833 1iwgA4 d.58.44.1 * 1.8e-20 33.3 %
:HMM:SCOP  781->1008 1iwgA8 f.35.1.1 * 5.7e-41 32.4 %
:RPS:PFM   3->1001 PF00873 * ACR_tran e-177 36.4 %
:HMM:PFM   5->1003 PF00873 * ACR_tran 5.8e-277 36.7 999/1021  
:BLT:SWISS 1->1008 Y895_HAEIN 0.0 40.0 %
:TM
:REPEAT 2|245->480|765->990
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39046.1 GT:GENE ABE39046.1 GT:PRODUCT acriflavin resistance protein GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2024981..2028085 GB:FROM 2024981 GB:TO 2028085 GB:DIRECTION + GB:PRODUCT acriflavin resistance protein GB:PROTEIN_ID ABE39046.1 GB:DB_XREF GI:91682744 InterPro:IPR001036 LENGTH 1034 SQ:AASEQ MALTDIFIKRPVLSVVVSMLILLIGFRAATTLPIRQYPKLSNTVVTITTAYPGASPDLMQGFITTPIEQAVASAEGVDYITSSSTQGQSLITVYIKLNFDPNQALTEVLAKVNSVKYLIPKEANDPVIVKSTGQTTAVMYIGFSSTELSGSAISDYLTRVVQPVLSTVEGVASADILGGQTFAMRVWLDPLKMAGRNVSPDDVAAAIRANNFQAAAGQTKGYFTVSNVSTNADLQNVEQFKRMTVKAKDGGFVRLQDVATVELAAQSTDSSVALSGDRAIFIGVQATPQGNPLNIVSGVRKLFPEIERNLPPSLKMKVAYDSTGFIRSSITEVEKTLIEAVAIVIVVIFLFLASFRSVIIPVVTIPLSLIGVCTAMLAMGFSINLLTLLAMVLAIGLVVDDAIVVVENIHRHLEEGKSPVQASLIGAREIVGPVISMTITLAAVYAPIGFLGGLTGALFREFAFTLAGAVIVSGVVALTLSPMMCSVLLKHQANQSWFARKVDQVFGATTRWYGRQLDRSLDYRPITAMFAVVILGLVGFMYMNTAKELAPEEDQGIVFAVTKAPKYANIDYSDFYGDKLDKAFAKFPETDLRFILNGTAGPNNGVAGMLLKPWDERTRSSLKLKPLVQAELSKIEGVNAFAFNLPSLPGGPGGLPIQMVINSTTGFRAVYEEMVKLKDAARKSGLFIVSDSDLDFNQPVVRVKIDRNKANDLGITMAQIGSSLATLLGGNYTNRFNLEGRSYQVIPQVPRALRLSPNSLDGYYVPSSTGQQVPLSTLVSIETGTDPNALTHFNQLNSATFQAVPMPGVTVGQAVDFLEQQSKNLPSGFSHSYLADARQYVQEGNQLAITFGFALIIIFLVLAAQFESLRDPLVIMISVPMAVSGALIPLFFGVATINIYTQVGLLTLVGLISKHGILMVEFARELQLKEGLDKRSAIEMSARVRLRPILMTTAAMVTGLLPLLTASGAGAASRFSIGLVVVSGMLIGTLFTLFVLPAVYVAIGTDHRAASESERAKQIEDYEMEHSSPSLKPT GT:EXON 1|1-1034:0| BL:SWS:NREP 1 BL:SWS:REP 1->1008|Y895_HAEIN|0.0|40.0|1007/1032| TM:NTM 11 TM:REGION 11->33| TM:REGION 325->347| TM:REGION 372->394| TM:REGION 426->448| TM:REGION 465->487| TM:REGION 523->545| TM:REGION 844->866| TM:REGION 874->896| TM:REGION 904->926| TM:REGION 950->972| TM:REGION 979->1001| NREPEAT 1 REPEAT 2|245->480|765->990| SEG 12->24|vlsvvvsmlilli| SEG 204->216|aaairannfqaaa| SEG 337->355|lieavaivivviflflasf| SEG 645->656|lpslpggpgglp| BL:PDB:NREP 1 BL:PDB:REP 3->1005|2v50B|e-135|31.4|994/1030| RP:PDB:NREP 1 RP:PDB:REP 3->978|3d9bA|e-175|23.9|975/1045| RP:PFM:NREP 1 RP:PFM:REP 3->1001|PF00873|e-177|36.4|994/1014|ACR_tran| HM:PFM:NREP 1 HM:PFM:REP 5->1003|PF00873|5.8e-277|36.7|999/1021|ACR_tran| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00873|IPR001036| GO:PFM GO:0006810|"GO:transport"|PF00873|IPR001036| GO:PFM GO:0016020|"GO:membrane"|PF00873|IPR001036| RP:SCP:NREP 6 RP:SCP:REP 61->203|1mwkA2|6e-30|15.7|134/163|c.55.1.1| RP:SCP:REP 227->323|1iwgA2|5e-18|20.6|97/104|d.58.44.1| RP:SCP:REP 314->490|1iwgA7|4e-33|40.1|177/199|f.35.1.1| RP:SCP:REP 553->644|1iwgA3|5e-15|26.1|92/107|d.58.44.1| RP:SCP:REP 699->785|1iwgA6|2e-22|31.0|87/88|d.225.1.1| RP:SCP:REP 791->1003|1iwgA8|3e-29|33.0|209/222|f.35.1.1| HM:SCP:REP 40->135|1iwgA1|1.4e-24|39.6|96/0|d.58.44.1|1/1|Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains| HM:SCP:REP 134->323|1iwgA2|2.1e-21|27.6|105/0|d.58.44.1|1/1|Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains| HM:SCP:REP 289->490|1iwgA7|1.3e-47|38.2|199/200|f.35.1.1|1/2|Multidrug efflux transporter AcrB transmembrane domain| HM:SCP:REP 553->650|1iwgA3|5.2e-20|32.7|98/0|d.58.44.1|1/1|Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains| HM:SCP:REP 649->833|1iwgA4|1.8e-20|33.3|99/0|d.58.44.1|1/1|Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains| HM:SCP:REP 781->1008|1iwgA8|5.7e-41|32.4|219/223|f.35.1.1|2/2|Multidrug efflux transporter AcrB transmembrane domain| OP:NHOMO 4507 OP:NHOMOORG 672 OP:PATTERN -------------------------------------------------------------------- D9K-------------------------------------------11-1--111-11--11--1--1111------------44366FGHE-I24---23G4B8LBJ8C--------------342344533465111111--1-68556551122222534362E47A4-2-----2-----2111--11212222222222222221111212212112122------6311111111111111111111-----------------------------------------------------------------------6116-------1-1-1222--------1-13122522213-1-----31E3CG77C11111AEOKSI9HLIJGD46574664547-NQFGOKMK5A9-FAACBBDBBA89BK7AA7495655544888888887CB866A61111111111--1-221341113311-111338936755BDHIGIBA7776CCGGAAAA7BDBHBGGN-5GHF7CA9BMEA7A7AGG9GAC8A111111187B5BF75A2467648A5531694779B77AB9AE92A62111222222333333333753488B875IE9JCDB6DEFFEGFKLFFHHDJQKMG--1B85B------75677B67999788A77-6887789768797777777BCB773456545666666546455A64664761-877777765777--17343335989H9C652111121111111117779759222A8DEEECCEFCDFEB99BC111111111B5AAB666669CCCBGHDAEAA8BB54442297BC46BB11111111-----------------------------1---111118C6 -------------1------------------------------------------------------------------------------------------------------------------------------------------------5----8-2-------5-----------1--E-----7---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 1003 STR:RPRED 97.0 SQ:SECSTR ##cHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEcccTTccHHHHHTTTHHHHHccccccTTEEEcccEEETTEEEcccEEcTTccHHHHHHHHHHHHHTTGGGccHHHHHHccEEEEccccccEEEEEEEccccHHHHHHHHHHHTHHHHHHcTTcccEEEEccccEEEEEEEcHHHHHHTTccHHHHHHHHHHHcccccccEETcccccTEcccccccccHHHHHTcEEEETTccEEEGGGGEEEEEEEcccccEEEETTEEEEEEEEccccccccTHHHHHHHHHHHTTTTcccTTEEEEEEEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccTTTTHHHHHHHHHHHHHHHHHHHTTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccTTccccccccHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHTTTEEEEEEEETcccTTEEEEEEEEccGGGcccGGGcHHHHHHHHHTTcTTcEEEEEcccccTTccccccEEEEEccccTTHHHHHHHHHHHHHHTTcTTccEEEEcccccccEEEEEEcHHHHHHHTccHHHHHHHHHHHHHcEEcccEEccccEEEEEEEEcGGGcccGGGGGGcEEEcccccEEEHHHHEEEEEEccccEEEEETTEEEEEEEEEccTTccHHHHHHHHHHHTTTccTTEEEEEcTHHHHcccTTTcHHHHHHHHHHHHHHHHHHHHTcccHHHHHHTTHHHHHHHHHHHHHTTcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH############################# DISOP:02AL 495-495,1007-1035| PSIPRED ccHHHHHHHccHHHHHHHHHHHHHHHHHHHcccHHHcccccccEEEEEEEEccccHHHHHHHHHHHHHHHHHcccccEEEEEEEEccEEEEEEEEEccccHHHHHHHHHHHHHHHHHccccccccccEEEEcccccEEEEEEEccccccHHHHHHHHHHHHHHHHHcccccEEEEEEccccEEEEEEEcHHHHHHccccHHHHHHHHHccccEEEEEEEccccEEEEEEEcHHcccHHHHHccEEEcccccEEEEEEEEEEEEccccHHHEEEEccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHcccccEEEEEEEccccccEEEEEEEEEEHHHccccHHHHHHHHHHHHHcccccEEEEEEcccccccccccEEEEEEEccHHHHHHHHHHHHHHHHHHccccEEEEEcccccccEEEEEEEcHHHHHHccccHHHHHHHHHHHHcccEEEEEEEccEEEEEEEEEcHHHHccHHHHcccEEEcccccEEEEEEEEEEEEEEcccEEEEEccEEEEEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHcccccccccccccccccccccc //