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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39059.1
DDBJ      :             transcriptional regulator, TetR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  75/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:222 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->193 3ccyA PDBj 1e-13 29.1 %
:RPS:PDB   11->204 3c2bA PDBj 7e-15 12.9 %
:RPS:SCOP  12->83 1z77A1  a.4.1.9 * 5e-14 26.4 %
:HMM:SCOP  1->88 1t33A1 a.4.1.9 * 8.4e-18 40.2 %
:HMM:SCOP  83->193 1vi0A2 a.121.1.1 * 3.1e-09 27.9 %
:RPS:PFM   16->59 PF00440 * TetR_N 1e-06 50.0 %
:HMM:PFM   16->59 PF00440 * TetR_N 6.4e-17 43.2 44/47  
:HMM:PFM   53->109 PF06276 * FhuF 0.00012 23.2 56/163  
:BLT:SWISS 12->87 BM3R1_BACME 3e-08 36.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39059.1 GT:GENE ABE39059.1 GT:PRODUCT transcriptional regulator, TetR family GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(2042156..2042824) GB:FROM 2042156 GB:TO 2042824 GB:DIRECTION - GB:PRODUCT transcriptional regulator, TetR family GB:PROTEIN_ID ABE39059.1 GB:DB_XREF GI:91682757 InterPro:IPR001647 LENGTH 222 SQ:AASEQ MARTRANDYDQKRLGILSRSAKLFAEHGYTGTSITMIAEACGVSKALMYHYYRSKDAVLFDLLADHLQHLVGVVEAAAHSDGDANERLFAIAAALLEAYRGADAEHQVQISSLKLLPPEQQEELKALERKLVSLMSDAISAAIPAATARPHLLKPLTMSLFGMLNWHYLWFREGKGLSRETYARMVTTLMVAGAEQAMDATEGDAKTARKKTARPAAVARRA GT:EXON 1|1-222:0| BL:SWS:NREP 1 BL:SWS:REP 12->87|BM3R1_BACME|3e-08|36.6|71/192| SEG 113->128|lkllppeqqeelkale| SEG 138->148|aisaaipaata| SEG 205->221|aktarkktarpaavarr| BL:PDB:NREP 1 BL:PDB:REP 9->193|3ccyA|1e-13|29.1|179/186| RP:PDB:NREP 1 RP:PDB:REP 11->204|3c2bA|7e-15|12.9|194/198| RP:PFM:NREP 1 RP:PFM:REP 16->59|PF00440|1e-06|50.0|44/47|TetR_N| HM:PFM:NREP 2 HM:PFM:REP 16->59|PF00440|6.4e-17|43.2|44/47|TetR_N| HM:PFM:REP 53->109|PF06276|0.00012|23.2|56/163|FhuF| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00440|IPR001647| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00440|IPR001647| RP:SCP:NREP 1 RP:SCP:REP 12->83|1z77A1|5e-14|26.4|72/75|a.4.1.9| HM:SCP:REP 1->88|1t33A1|8.4e-18|40.2|87/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 83->193|1vi0A2|3.1e-09|27.9|111/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 82 OP:NHOMOORG 75 OP:PATTERN -------------------------------------------------------------------- ---------------1--------11------------11-------------------------11---------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-11111-----------------2------------1------3---1-1--11-11------------------------------------------------1---212-1111111111211111111111111111--11111---2---11-------------------11-------------------------1111-1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-1------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 203 STR:RPRED 91.4 SQ:SECSTR #cccccccHcHHHHHHHHHHHHHHHHHcGGGccHHHHHHHHTccHHHHHHHHccHHHHHHHHHHHHTcccccccccccccHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHcccHHHHHHHHTTHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHHHHccHHHHHHHT################## DISOP:02AL 1-15,200-214,216-216,221-223| PSIPRED ccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHccHHHHHHcc //