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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39090.1
DDBJ      :             Hydroxypyruvate isomerase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  266/915 : Eukaryota  58/199 : Viruses  0/175   --->[See Alignment]
c.1.15
:260 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->258 1k77A PDBj 6e-54 42.0 %
:RPS:PDB   3->256 3cqjA PDBj 1e-24 13.4 %
:RPS:SCOP  2->258 1k77A  c.1.15.5 * 2e-89 42.0 %
:HMM:SCOP  1->256 1k77A_ c.1.15.5 * 4.7e-74 36.3 %
:RPS:PFM   28->203 PF01261 * AP_endonuc_2 3e-06 29.2 %
:HMM:PFM   21->216 PF01261 * AP_endonuc_2 9.8e-29 24.7 190/211  
:BLT:SWISS 1->257 YGB4_RALEU 1e-68 50.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39090.1 GT:GENE ABE39090.1 GT:PRODUCT Hydroxypyruvate isomerase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2073983..2074765 GB:FROM 2073983 GB:TO 2074765 GB:DIRECTION + GB:PRODUCT Hydroxypyruvate isomerase GB:PROTEIN_ID ABE39090.1 GB:DB_XREF GI:91682788 InterPro:IPR012307 LENGTH 260 SQ:AASEQ MPRFAANLSLMFNENAFLDRFDAAAAAGFTAVEFLFPYDHSPEDIAERLRRNNLVQALFNLPPGDWAAGEKGFAARPDKFEKLQQSLRIALPYALATGVKRVHLMAGIADRNDVAAVVAFRRSLAVAAHFFAPHGIDVVIEPLNKRDVPGYFLDDFEFARDLIRELDVPNVKLQFDVYHCQILHGDVAMRLREMMPIVGHIQIASVPSRNEPDSGELNYPFLFEEFDRLGYAGFVGAEYRPRGATVDGLGWFAPYAGTRT GT:EXON 1|1-260:0| BL:SWS:NREP 1 BL:SWS:REP 1->257|YGB4_RALEU|1e-68|50.2|257/260| SEG 23->27|aaaaa| BL:PDB:NREP 1 BL:PDB:REP 2->258|1k77A|6e-54|42.0|255/256| RP:PDB:NREP 1 RP:PDB:REP 3->256|3cqjA|1e-24|13.4|246/276| RP:PFM:NREP 1 RP:PFM:REP 28->203|PF01261|3e-06|29.2|168/200|AP_endonuc_2| HM:PFM:NREP 1 HM:PFM:REP 21->216|PF01261|9.8e-29|24.7|190/211|AP_endonuc_2| RP:SCP:NREP 1 RP:SCP:REP 2->258|1k77A|2e-89|42.0|257/260|c.1.15.5| HM:SCP:REP 1->256|1k77A_|4.7e-74|36.3|256/0|c.1.15.5|1/1|Xylose isomerase-like| OP:NHOMO 529 OP:NHOMOORG 324 OP:PATTERN -------------------------------------------------------------------- --3-1--1222----------1---2------1----132----211------111-----1----1111------------1----------1---------122-3-2--------------------------222---------------------------------------------1---------------------------------111---------------------------------------------------------------------------------------------------------------------------------------11---------------1-31--------11221--11-11111111111111-1111121213--3---3344433222---1-2----211--------2---1--1-------------------------------21--111-12222222111-223222221222322221222221-11212122111-----1----------111---------1---1---------------------------------------------1--11---1-1-----------------------------------1--13113342433-133232331313133333-1231111-2-22112222222222211--1-3--111111111111--------------1111---1-1--1-111111111111---3-22221213211122221----------1--1-----1----11---------------------------------------------------------------------2- ------1-----------------------------------------------------------------------------------------------------3-2111-11111-111211618B1-424-1-121111-111111-11211122-121111114112------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 260 STR:RPRED 100.0 SQ:SECSTR cccEEEEGGGccccccHHHHHHHHHHTTccEEEEEcccHHHHHHHHHHHHHHccEEEEEEEGcccGGGTccTTcccHHHHHHHHHHHHHHHHHHHHHTccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHTcEEEEEcccccccccGGGccHHHHHHHHHHHccTTEEEEccHHHHHcccccHHHHHHHTGGGcccEEEcEEETEEcTTcccccHHHHHHHHHHTTccccEEEcccGGGcccHHHHHHHHHHHHHH DISOP:02AL 259-261| PSIPRED cccHHEEHHHHcccccHHHHHHHHHcccccEEEEcccccccHHHHHHHHHHcccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccHHHccHHHHHHHHHHcccccEEEEEccHHHHcccccHHHHHHHccccEEEEEEcccccccccccccccHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHccc //