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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39113.1
DDBJ      :             short-chain dehydrogenase/reductase SDR
Swiss-Prot:             

Homologs  Archaea  48/68 : Bacteria  875/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:304 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->249 2et6A PDBj 2e-43 44.7 %
:RPS:PDB   5->249 2ae1A PDBj 9e-39 23.3 %
:RPS:SCOP  11->249 1pwxA  c.2.1.2 * 2e-40 17.0 %
:HMM:SCOP  3->252 1zemA1 c.2.1.2 * 4.5e-62 35.3 %
:RPS:PFM   8->180 PF00106 * adh_short 5e-23 38.2 %
:HMM:PFM   8->181 PF00106 * adh_short 1.3e-36 28.0 164/167  
:BLT:SWISS 8->247 FOX2_YEAST 7e-46 42.5 %
:PROS 152->180|PS00061|ADH_SHORT
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39113.1 GT:GENE ABE39113.1 GT:PRODUCT short-chain dehydrogenase/reductase SDR GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(2107099..2108013) GB:FROM 2107099 GB:TO 2108013 GB:DIRECTION - GB:PRODUCT short-chain dehydrogenase/reductase SDR GB:PROTEIN_ID ABE39113.1 GB:DB_XREF GI:91682811 InterPro:IPR002198 InterPro:IPR002347 LENGTH 304 SQ:AASEQ MAKALDGKVIIVTGAGRGIGREIALLAAREGAKVVVNDPGGAADGSGTDASPAEQVVEEIKKEGGTAVANFETVAEAVPASKIVKQAVDTYGKLDGVVNNAGILRDAIFHRMSIDAFEQVIKVHLMGSFYVSHAAARLYREQESGSFVHFTSTSGLIGNFGQANYAAAKLGIVGLSKSIALDMQRFNVRSNCVSPFAWSRLIGTIPTETEEEKARVARMQQMGPEKIAPLSVFLLGDAAKDVTGQIFAVRMNEIFLMGQSRPIRSVHRDGGWTCETLAEHGMPALKGSFYKLDRSADIFNWDAI GT:EXON 1|1-304:0| BL:SWS:NREP 1 BL:SWS:REP 8->247|FOX2_YEAST|7e-46|42.5|228/900| PROS 152->180|PS00061|ADH_SHORT|PDOC00060| SEG 38->53|dpggaadgsgtdaspa| BL:PDB:NREP 1 BL:PDB:REP 8->249|2et6A|2e-43|44.7|219/582| RP:PDB:NREP 1 RP:PDB:REP 5->249|2ae1A|9e-39|23.3|236/252| RP:PFM:NREP 1 RP:PFM:REP 8->180|PF00106|5e-23|38.2|165/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 8->181|PF00106|1.3e-36|28.0|164/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 11->249|1pwxA|2e-40|17.0|224/252|c.2.1.2| HM:SCP:REP 3->252|1zemA1|4.5e-62|35.3|241/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 10715 OP:NHOMOORG 1113 OP:PATTERN 111-233686867662-61321117227334722---------21-44--622-11----22743-34 AER2P1-2338231ayhHH-Hq55SvHGGHGNmt*uUt**4W9qA9763B61ICD64511AEK1BCJNLI81111212-185P11213457627111--83N3B8Y7V8E11111111111111243234311453BBBCB222E9CAGE5465422111422252CH9S6112111111112B6456441F7MEEEEEFDGEEFEEFCHEJJCJCCDAHFKIC9666675FW744444334444443A887B82A178151217A5578454358876434433322222222222222354444444444412211122254357C4443333535A56626866321157122A611322433333551392AbBBK12212D6nRQ469LFLKIFGGFEEGEGGO-BCHB9WAIOZW1jQQKVSTneceaNSEMAF9MC8AEBAE66666666KDAA47B7111111111111223312212221211119DWoB5BQNEVeUWZcaGEDEDVVjeFEFE5JlLwNsbW47IICG8FCDLGUDSP6A63539831221111459L964O5A311111322314553B34737875GM221221111111111111111121211668987B9AAJB3677684AA9886B7A77771-2333611-1118BAB5D5ACC9A999AA-C9AA979BABC8ABAABAAFJIB657A967999998997879AK8977768-178888888888811162422277672AGFC111726111111352FGILH7I5A8H8KKIIDJLUHGGKJIIHI5232232221333D5455469578BDB9B9988A42222234AA6576--------1-2----1---1-1------1-------3332156565282 11--788-1-2-59CKROLOLMKbQZRDE6BACCGCCFCEBGG9C9EDRRUbrmHLDDDEDB969244352266732222465697-8-DZBRDQA776873AFA5-C77iCMA9G932654A5DB192Eb9-8894455A45F646316B2496C6GJQUK9TLDB88CFDQFR3763M1114BBJNnNfA55G7982 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 304 STR:RPRED 100.0 SQ:SECSTR cccTcTTcEEEEETcccHHHHHHHHHHHTTTcEEEEEEccHHHHHHTHHHHHHHHHHHHHHHTTccEEEEEccTTcHHHHHHHHHHHHHHTTTcccEEEcccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHHHTTccEEEEEEccGGGTcccTTcHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEcccccccHHHHHHHHHHHHTccccccccHHHHHHHHHHHHcGGGTTccccEEEEHHTTTccTTcHHHHHHHHHcTTGGcHHHccHHHHHHHTcccHHHHHGGGccHHcc DISOP:02AL 1-3| PSIPRED ccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEccccccccccccccHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccEEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEccccccccHHcccHHHHHHHHcccccccccHHHHHHHHHHHHcHHHccccccEEEEcccEEEEEccccccccccccccccHHHHHHccHHHHccccccccccccccccccc //