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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39122.1
DDBJ      :             AMP-dependent synthetase and ligase
Swiss-Prot:             

Homologs  Archaea  15/68 : Bacteria  590/915 : Eukaryota  95/199 : Viruses  0/175   --->[See Alignment]
e.23.1
:635 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   87->532 1ba3A PDBj 2e-13 28.9 %
:RPS:PDB   52->613 2d1tA PDBj 3e-42 19.6 %
:RPS:SCOP  5->613 1pg3A  e.23.1.1 * 1e-39 15.1 %
:HMM:SCOP  1->619 1pg4A_ e.23.1.1 * 4.2e-83 26.2 %
:RPS:PFM   88->463 PF00501 * AMP-binding 1e-21 31.2 %
:HMM:PFM   88->501 PF00501 * AMP-binding 4.4e-55 25.6 391/418  
:BLT:SWISS 56->466 LCFB_BACSU 4e-19 26.8 %
:PROS 231->242|PS00455|AMP_BINDING

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39122.1 GT:GENE ABE39122.1 GT:PRODUCT AMP-dependent synthetase and ligase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2116664..2118571 GB:FROM 2116664 GB:TO 2118571 GB:DIRECTION + GB:PRODUCT AMP-dependent synthetase and ligase GB:PROTEIN_ID ABE39122.1 GB:DB_XREF GI:91682820 InterPro:IPR000873 LENGTH 635 SQ:AASEQ MDAMANPTAFAGDAVRRAETHPLRDVSFGEIGIATERRPDGTIYVRSTTSLADYPVRITDRLHHWAEQAPERVFMAERDGNGGWRRITYAEMLSAAQKIASALLARGLSAERPVMILSGNSIDHAQIMFGALYAGVAMCPVSPPYSLVSKDFGKLRSIVGLLTPGLIFADDITPFAPAILATVPSKVELAATRGEVTGRRVTSLDELMNTPDHPGLADAHDAIGHDTIAKFLLTSGSTGNPKAVINTQRMICANQVMIREAMAFLKDEPPVIVDWLPWNHTFGGNHNIGLTLFNGGSMYIDDGKPTPAGIAATIRNLREIAPTVYFNVPKGYESLLPVLREDAELRKMFFSGLHAMFFSGASLAAHVWEGLDEVGAQETGARVPMLTGLGATETAPFFMSVTPQTSRSGHVGLPVPGNEAKLVPNNGKLEVRARGPNITPGYWRAPDLTAKAFDEEGFYKLNDALKPVDPDDLAAGFDFDGRISEDFKLASGTWVSVGPLRAKFIAACAPLARDVVIAGLDRDEVSALVVLDVDGCKLINPTLPLDDLAGMAKDELIREAFRERFARLLTQATGSSNRITRAILLGEPLSIDTGEVTDKGSVNQRAVLEQRAALIGDLYAVPPPAHVIALDEDAE GT:EXON 1|1-635:0| BL:SWS:NREP 1 BL:SWS:REP 56->466|LCFB_BACSU|4e-19|26.8|385/513| PROS 231->242|PS00455|AMP_BINDING|PDOC00427| BL:PDB:NREP 1 BL:PDB:REP 87->532|1ba3A|2e-13|28.9|415/540| RP:PDB:NREP 1 RP:PDB:REP 52->613|2d1tA|3e-42|19.6|506/538| RP:PFM:NREP 1 RP:PFM:REP 88->463|PF00501|1e-21|31.2|349/405|AMP-binding| HM:PFM:NREP 1 HM:PFM:REP 88->501|PF00501|4.4e-55|25.6|391/418|AMP-binding| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00501|IPR000873| GO:PFM GO:0008152|"GO:metabolic process"|PF00501|IPR000873| RP:SCP:NREP 1 RP:SCP:REP 5->613|1pg3A|1e-39|15.1|584/634|e.23.1.1| HM:SCP:REP 1->619|1pg4A_|4.2e-83|26.2|569/643|e.23.1.1|1/1|Acetyl-CoA synthetase-like| OP:NHOMO 1614 OP:NHOMOORG 700 OP:PATTERN 11-----11--1-11----11--13--2--12---------------1-------------------- 1-4-122122221231144-4222A5444444523243A6112512-32431326331--324251553333232333----6111--11---1121--1-1--111121---------------11-11-12-1143375---52331132111111111-1211-1131-111---1-11-11133--15232222222212222221122322222433321------31-11111111111111----1----------------------------------------------------------------------1---11111111-1-3---------1--3-12----13---511111-1-1--2335-----2398C1227496811111111113-44244332254-322323123331311325431122225--------11---653------------------------------1-52-244243455535133133575543256357AB812223442445779641-21---3311111111115421521-222-12111-232131-23454434-1---------------------11-3--11-221111124433334433334143335---1411-------1212111111111121-1112211121111221221111111321-1111111111111121111111--222222222222---2-----22221-423111--1-11111---22122121124255553446543534445111111111-2334222222322211222222221111--1111--11--------21--------------------------------------- 1----2------331-1-2----12-21----11--1----11111--122--1--2--111---------------------------12-1611211122-225-3--43A2712------------BH2162----13-14211-111-----12--2--------2-3362112-2-11133224242-212112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 593 STR:RPRED 93.4 SQ:SECSTR ###############ccEEEccHHHHHHHHTcGGGHHHHccTTcEEcccccccccccHHHHHHHHHHHHHHHTcEEEEETTTTccEEEHHHHHHHHHHHHHHHHHHTccTTcEEEEEccccTTTHHHHHHHHHHTcEEEEEcTTccHHHHcHHHHHHHHHHHcccEEEEcTGHTTHHHHHHEEEETTcccccTTcccHHHHHHHTccTHHTccGGGcccccccTTTcEEEEEcccccccccccEEEEHHHHHHHHHHHTcTTTcccccTTcEEEEcccTTcHHHHHHHHHHHHHTcEEEEEccEcccccHHHHHHHHHHTTccEEEEcGHHHHGGHHHHHHcccGGGcccTTccEEEEEcccccHHHHHHHHHHHHHHHTTccccEEEEEcGGGccEEEEccTTcccTTcccEEcTTcEEEEccTTccEEEEEEcTTcccEETTcHHHHHHHccTTccEEEEEEEEEcTTEEcTTccEEEEEEGGGccccTTccccHHHHHHHHHHHTcTTEEEEEEEEEEETTTEEEEEEEEEEcTTccccHHHHHHHHHTTHHcHHHHHTTTcEEEc#######TccGGGccTTcEEEcccccccTTcccccHHHHHHHHHcc#################### PSIPRED cccEEcHHHccHHHHHHHHHccccccccccccccccccccccEEcccccccccccccHHHHHHHHHHHccccEEEEEccccccEEEEEHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHccEEEEccccccHHHHHHHHHHHHHHHccccEEEEHHHHHHHHHHHHHccccEEEEEccccccccccccHHHHHHccccccccccccccccccEEEEEEcccccccccEEEEcHHHHHHHHHHHHHHccccccccEEEEEcccHHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHcccEEEccHHHHHHHHHHHHccccHHHccccccEEEEEccccccHHHHHHHHHHHHHHHccccEEEEcccccHHHcEEEEccccccccccccccccccEEEEEcccccEEEEEccHHHHcHHcccHHHHHHHHccccccccccEEEEEcccccccEEEEEEEcHHHEEEcccEEEEcccHHHHHHHHccccEEEEEEEEcccccEEEEEEEcHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHccccccccEEEEHHccc //