[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39135.1
DDBJ      :             Radical SAM
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  137/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.60.2c.1.28d.350.1
:412 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   290->363 2ztdB PDBj 2e-04 39.4 %
:RPS:PDB   43->295 3c8fA PDBj 6e-15 12.5 %
:RPS:PDB   311->357 2eduA PDBj 1e-07 21.3 %
:RPS:SCOP  57->166 2h7aA1  d.350.1.1 * 8e-11 15.0 %
:RPS:SCOP  275->357 2a1jB1  a.60.2.5 * 1e-08 22.5 %
:HMM:SCOP  46->197 1r30A_ c.1.28.1 * 6.8e-14 18.4 %
:HMM:PFM   63->196 PF04055 * Radical_SAM 1.9e-08 17.1 129/166  
:HMM:PFM   330->354 PF00633 * HHH 3.4e-06 48.0 25/30  
:BLT:SWISS 39->113 MOAA_RHOPS 3e-06 35.1 %
:BLT:SWISS 263->353 RUVA_NATTJ 7e-04 35.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39135.1 GT:GENE ABE39135.1 GT:PRODUCT Radical SAM GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(2134256..2135494) GB:FROM 2134256 GB:TO 2135494 GB:DIRECTION - GB:PRODUCT Radical SAM GB:PROTEIN_ID ABE39135.1 GB:DB_XREF GI:91682833 InterPro:IPR006638 InterPro:IPR007197 LENGTH 412 SQ:AASEQ MDVQRKLAILADAAKYDASCASSGTEKRDSRDGKGLGSTAPGMGICHSYAPDGRCISLLKVLLTNACNYDCLYCVNRASSNVPRARFTVDEVVQLTLDFYRRNYIEGLFLSSGIIRSADYTMEQIVEVARRLREEHHFRGYIHLKTIPEADDALISKAGRYADRLSINIEVPEEQSLAALAPEKNVRAIRRTMGRLRLKLDEAKEARTAPSRAKPPRFAPAGQSTQMIVGADAATDQTILDTSANLYGSYNLKRVYYSAFSPIPDSSRALPLQAPPLIREHRLYQADWLMRFYGFDAGEIIDPSAGMLSLEIDPKLAWALRHRERFPLDVNRASREDLLRVPGFGRKAVERIIATRRHSAIRSMDLARLHIPRNKALPFIVLSDHRPTPHLLDSARLAERFRPKAQQLGFGF GT:EXON 1|1-412:0| BL:SWS:NREP 2 BL:SWS:REP 39->113|MOAA_RHOPS|3e-06|35.1|74/344| BL:SWS:REP 263->353|RUVA_NATTJ|7e-04|35.7|84/214| BL:PDB:NREP 1 BL:PDB:REP 290->363|2ztdB|2e-04|39.4|71/182| RP:PDB:NREP 2 RP:PDB:REP 43->295|3c8fA|6e-15|12.5|232/245| RP:PDB:REP 311->357|2eduA|1e-07|21.3|47/98| HM:PFM:NREP 2 HM:PFM:REP 63->196|PF04055|1.9e-08|17.1|129/166|Radical_SAM| HM:PFM:REP 330->354|PF00633|3.4e-06|48.0|25/30|HHH| RP:SCP:NREP 2 RP:SCP:REP 57->166|2h7aA1|8e-11|15.0|107/109|d.350.1.1| RP:SCP:REP 275->357|2a1jB1|1e-08|22.5|71/78|a.60.2.5| HM:SCP:REP 46->197|1r30A_|6.8e-14|18.4|147/312|c.1.28.1|1/1|Radical SAM enzymes| OP:NHOMO 148 OP:NHOMOORG 145 OP:PATTERN -----1--------------------------111----------11-11------------------ ------------------------------------------------------------------------------1111--1---1111-1-----111-1-111-1---------------111111-11-1---22-----------------------------------------------11-------------------------------------------------------------------------------------------------------------------------------------1-111-------1-11-------1-1-1-111-11-1--11-----1-1--11-111--------11-1-1-1-1------------11111-111----11111-111--1-----1111111-------------11---------------------------------11---------------------11--------------------1--1---------1-1-------------------------------1-1111----------1--------------------1--------1----1-------------------------------------------------------------------------------------------------------------------------------------------------------111111-11------1111111111-11------------------------1-11111111--------------------------------------------------1--11-------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 340 STR:RPRED 82.5 SQ:SECSTR ##########################################cEEEEEEEEEEccccEEEEEEEcccccccTTcccGGGccTTccEEEcHHHHHHHHGGGHHHHTcTTcEEEEEEccGGGGHHHHHHHHHHHHTTTTccEEEEEccccccccHHHHHHHHTccEEEEEcccccHHHHHHHHccccHHHHHHHHHHHHTHHHHHHHHTHHHHHTTcHHHHccEEEEEEEcTTTTccHHHHHHHHHHHHHHccEEEEEEEEcccccHTTcccTTTTcccccHHHHHHHHHHHHTTTccccHHHHHHcTTHHHHHHTHHTTccEEccccccTTTGGGcccccccTTTTccTTcHHHHHHHHHHHTTcEEcccccccccHHTcHHH############################## DISOP:02AL 1-2,21-37,203-217| PSIPRED ccHHHHHHHHHHHHccccHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccEEEccHHHHHHHHHHHHHHHHcccEEEcccccccHHHHHHHHHHHHHHHHcccccccEEEEEEcccccHHHHHHHHHHHHHHEEEEEcccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHcccccccccccccHHHHHHHccccccccccccccHHHHHHcccccHHHHHHHHHHcccccccHHHHHcccEEEEEEEEEEEEcccccccccccHHHHHHHHHHHHHHHcccc //