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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39139.1
DDBJ      :             L-carnitine dehydratase/bile acid-inducible protein F
Swiss-Prot:             

Homologs  Archaea  19/68 : Bacteria  324/915 : Eukaryota  144/199 : Viruses  0/175   --->[See Alignment]
c.123.1
:498 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   237->477 1x74A PDBj 1e-14 32.8 %
:RPS:PDB   299->420 2c9eA PDBj 2e-25 10.0 %
:RPS:SCOP  230->422 1xa3A  c.123.1.1 * 8e-39 25.4 %
:HMM:SCOP  62->233 1q7eA_ c.123.1.1 * 3.1e-26 28.2 %
:HMM:SCOP  235->433 1p5hA_ c.123.1.1 * 1.9e-54 41.1 %
:RPS:PFM   294->423 PF02515 * CoA_transf_3 2e-16 37.5 %
:HMM:PFM   61->155 PF02515 * CoA_transf_3 5.1e-05 25.5 94/191  
:HMM:PFM   294->437 PF02515 * CoA_transf_3 3.2e-43 35.0 143/191  
:BLT:SWISS 236->415 CG010_HUMAN 3e-20 33.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39139.1 GT:GENE ABE39139.1 GT:PRODUCT L-carnitine dehydratase/bile acid-inducible protein F GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 2141372..2142868 GB:FROM 2141372 GB:TO 2142868 GB:DIRECTION + GB:PRODUCT L-carnitine dehydratase/bile acid-inducible protein F GB:PROTEIN_ID ABE39139.1 GB:DB_XREF GI:91682837 InterPro:IPR003673 LENGTH 498 SQ:AASEQ MGARVRPGNDAEDVIVVALCRIMRIPHVQERLLMQTPRELLAELWASVGGDGAALDRVTLTGEEPQLPSSFRGDAAAQVSIAASGLAAAEIWRMRSGRAQTVSVDTRHAAIECRSERYLRRDGEPPPPMWDPIAGVYQVSGGRYVRLHTNFPHHRAAVCEVLGCKSEREAVQAALLNWDGEAFETAAYRAGGVVALMRSREEWQALPQASALDALPLVEITKIGDAAPKPWPAGERPLAGLRVLDLSRVIAGPVAGRTLAAHGAEVMLVSSERLPSIPWLVIDTGRGKLSSFADLTTTEGHAALRDLLTDADIFSQGYRPQSLAALGFSPEEAATLNPGIVYVSLSAYGRGGPWAARRGFDSLVQCATGFNHAEGQAAGVAGPKELPMQVLDHATGYLMAFGAMIAKARQAREGGSWHVQVSLARTGKWLWEMGRLAEGLAAPDIVQVAAAPFLDQALSSFGQLTAVRHAAMLSETRAYWARPAVPLGTDPPRWPAQG GT:EXON 1|1-498:0| BL:SWS:NREP 1 BL:SWS:REP 236->415|CG010_HUMAN|3e-20|33.9|177/445| BL:PDB:NREP 1 BL:PDB:REP 237->477|1x74A|1e-14|32.8|204/354| RP:PDB:NREP 1 RP:PDB:REP 299->420|2c9eA|2e-25|10.0|120/317| RP:PFM:NREP 1 RP:PFM:REP 294->423|PF02515|2e-16|37.5|128/189|CoA_transf_3| HM:PFM:NREP 2 HM:PFM:REP 61->155|PF02515|5.1e-05|25.5|94/191|CoA_transf_3| HM:PFM:REP 294->437|PF02515|3.2e-43|35.0|143/191|CoA_transf_3| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF02515|IPR003673| GO:PFM GO:0008152|"GO:metabolic process"|PF02515|IPR003673| RP:SCP:NREP 1 RP:SCP:REP 230->422|1xa3A|8e-39|25.4|189/400|c.123.1.1| HM:SCP:REP 62->233|1q7eA_|3.1e-26|28.2|170/417|c.123.1.1|1/2|CoA-transferase family III (CaiB/BaiF)| HM:SCP:REP 235->433|1p5hA_|1.9e-54|41.1|197/427|c.123.1.1|2/2|CoA-transferase family III (CaiB/BaiF)| OP:NHOMO 2192 OP:NHOMOORG 487 OP:PATTERN --1-----21412212-1-111-11---2-22-------------------------------2---- --2241-1---1--4OE44-4E--9Q444444BDGE4GNc-H3O1--2----442211--12A122B6634-111-----4-6------------------1------12--------------------------44475---12----------------------------------------11---11----------------1--------11313--------1----------------------1------2-1--11--------------------------------------------------------12-----1111-1--2-------1---1----12---------------1--6338-----2-KAB--7B59A533442443442-34A33E39755-41111222133296472659222425622222222511--722------------------------------36E5-5kWEeDCCDGE5567788GE887858T4QOajb-678563687M7H9LQ445----21----------522-111------------1-------111111-2---------------------------1---1-4-3--1---------------------------------1-2--1--1111111--111111111-1111111-------1-----------------111111111-----------------------1---2212---------------44324242221144443655342445213------------------------------------------111111------------------------------------------------- ----111-----1125464644389A72211111213555445222324868C8567233322-1---------1------111-1---3534325311-113432-2-22251221--1-21222151AT2-633212131222111112-15-5225221-22212329-222-1-------1---63---1-1111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 232 STR:RPRED 46.6 SQ:SECSTR ###########################################################################################################################################################################################################################################cTTTTcEEEEEcccTHHHHHHHHHHHTTcEEEEEEcEccccccGGGGcGGcccEEEEccTTcHHHHHHHHHHHHHHHHHHTTccTTcccHHHHHHHHHHHHcHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHTTcTTTcccccHHHHHHHHHHHHHHHHTccHHHHHHGGGTcTTHHHHHHHHH###HHHHHHHccc#######EEEEEEHHHHHHHHTHHHHHHHHTTcccccT##################### DISOP:02AL 1-3,6-7,222-236,492-492,497-499| PSIPRED cccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccHHHHcEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEcHHHHHHHHHHHHHcccccccccHHHHHHccccccccccEEEEccccHHHHHHHHHHccccccHHHHHHHHHcccHHHHHHHHHHcccEEEEEccHHHHHHcHHHHHHHccccEEEEccccccccccccccccccccEEEEEcccHHHHHHHHHHHHHccEEEEEEccccccccHHHHHHccccEEEEEEcccHHHHHHHHHHHHHccEEEEcccHHHHHHccccHHHHHHHcccEEEEEEEcccccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEHHHHHHHHHHHHHHHHHHccccccccccccccccccEEcccccEEEEEHHHHHccccHHHHHccHHHccccccccccc //