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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39142.1
DDBJ      :             Type I secretion outer membrane protein, TolC
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  385/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
f.5.1
:472 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   38->443 1tqqA PDBj 4e-15 27.0 %
:RPS:PDB   40->436 3d5kA PDBj 1e-39 17.1 %
:RPS:SCOP  40->436 1wp1A  f.5.1.1 * 2e-41 17.4 %
:HMM:SCOP  16->438 1wp1A_ f.5.1.1 * 1.5e-76 29.0 %
:RPS:PFM   42->230 PF02321 * OEP 5e-12 27.1 %
:RPS:PFM   252->436 PF02321 * OEP 6e-08 25.0 %
:HMM:PFM   42->230 PF02321 * OEP 1.7e-31 25.8 186/188  
:HMM:PFM   251->436 PF02321 * OEP 3.6e-25 26.3 186/188  
:BLT:SWISS 31->438 TOLC_VIBCH 1e-20 27.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39142.1 GT:GENE ABE39142.1 GT:PRODUCT Type I secretion outer membrane protein, TolC GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(2144351..2145769) GB:FROM 2144351 GB:TO 2145769 GB:DIRECTION - GB:PRODUCT Type I secretion outer membrane protein, TolC GB:PROTEIN_ID ABE39142.1 GB:DB_XREF GI:91682840 InterPro:IPR003423 InterPro:IPR010130 LENGTH 472 SQ:AASEQ MDWWTGIISNAGSAARRSSAGLCAAAIGVALTGPVSAEGLPDALAKAYQFNPQLNAERARQRATDENVPAALSGYRPQIVASLGTGLQAVRNLLPDNTIQTATLKPWTIGVTVTQTLFNGFRTANSVRVAELQVKSGREALRNVGQGVLLDAVTAYTNVLANQALVAAQKSNVDFLGQTLDITNKRLNAGDVTPTDTAQAEARLNRGRADLNAAEVNLAVSEATYAQVVGNAPSRLSPASPVDRLLPRSREDAVSLAMQGNPAVLAAGFDVDVATTTIKVAEGSLLPSITLQGSASRSRATDSTLGSQGVDQASVVGQIAAPIYDGGFAAAQTRQSKEIASQSRLVLDQIRNQSRTAAIGAWVSNEGSKIAVSASESEVRAAEIALKGVSREAQGGQRTTVDVLNSQQDLTQARARLIGAQRDRVIASYTLLSAIGRLDVKTLGLNTPDYLPDVHYHQVRDAWHGLRTPSGD GT:EXON 1|1-472:0| BL:SWS:NREP 1 BL:SWS:REP 31->438|TOLC_VIBCH|1e-20|27.2|389/438| SEG 9->26|snagsaarrssaglcaaa| SEG 370->385|iavsasesevraaeia| BL:PDB:NREP 1 BL:PDB:REP 38->443|1tqqA|4e-15|27.0|381/428| RP:PDB:NREP 1 RP:PDB:REP 40->436|3d5kA|1e-39|17.1|397/454| RP:PFM:NREP 2 RP:PFM:REP 42->230|PF02321|5e-12|27.1|188/189|OEP| RP:PFM:REP 252->436|PF02321|6e-08|25.0|185/189|OEP| HM:PFM:NREP 2 HM:PFM:REP 42->230|PF02321|1.7e-31|25.8|186/188|OEP| HM:PFM:REP 251->436|PF02321|3.6e-25|26.3|186/188|OEP| GO:PFM:NREP 4 GO:PFM GO:0005215|"GO:transporter activity"|PF02321|IPR003423| GO:PFM GO:0006810|"GO:transport"|PF02321|IPR003423| GO:PFM GO:0005215|"GO:transporter activity"|PF02321|IPR003423| GO:PFM GO:0006810|"GO:transport"|PF02321|IPR003423| RP:SCP:NREP 1 RP:SCP:REP 40->436|1wp1A|2e-41|17.4|397/456|f.5.1.1| HM:SCP:REP 16->438|1wp1A_|1.5e-76|29.0|421/0|f.5.1.1|1/1|Outer membrane efflux proteins (OEP)| OP:NHOMO 579 OP:NHOMOORG 389 OP:PATTERN -------------------------------------------------------------------- -11-------------------------------------------------------------------------------------332--2----------11-1-2---------------1-1131122-2----------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-222221111323231132134111111111111-11112112111-1112--1---111311111111112111111111122322311111-111111--1111111111111111-112221-11--11111111111--1-1111-11-12434-21112212121422-111231212-------1122231112124-1-1221-1--1--12-11-1---1111----------------------11222112112111222211111112222112---12--------11221221221111111-2111111111212111112-1-43222111111111111111121111111--111111111111--12-----3213---11---------------222221111--144244353243431233---------22221222223433311-1-111111-----2-----------------------------------------------------1-- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------1-------------1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 406 STR:RPRED 86.0 SQ:SECSTR #####################################ccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHTTccccEEEEEEEEEEEcTTTccccccEEEEEEEEEEEEEEEEEcTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccTTccccTTcccccccccccGGGHHHHcHHHHHHHHHHHHHHHHHHHHHTTcccEEEEEEEEEEEEcccTTcccTTcEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccHHHH############################# DISOP:02AL 90-101,471-473| PSIPRED ccHHHHHHHcccHHHHHHcccHHHHHHHHHHccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEccccccccccccccccEEEEEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHccccccccccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEccccccccccccccEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcccccccccccccccccccccccccccccc //