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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE39149.1
DDBJ      :             diguanylate cyclase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  656/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
d.58.29
:381 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   210->378 1w25A PDBj 1e-33 43.8 %
:RPS:PDB   209->344 3btaA PDBj 5e-42 8.3 %
:RPS:SCOP  226->379 1w25A3  d.58.29.2 * 2e-34 40.3 %
:HMM:SCOP  226->380 1w25A3 d.58.29.2 * 2.1e-51 45.8 %
:RPS:PFM   224->376 PF00990 * GGDEF 5e-28 49.3 %
:HMM:PFM   221->377 PF00990 * GGDEF 1.7e-44 43.3 157/161  
:HMM:PFM   95->159 PF06942 * GlpM 0.00017 18.5 65/107  
:BLT:SWISS 210->378 PLED_CAUCR 4e-33 43.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE39149.1 GT:GENE ABE39149.1 GT:PRODUCT diguanylate cyclase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(2150543..2151688) GB:FROM 2150543 GB:TO 2151688 GB:DIRECTION - GB:PRODUCT diguanylate cyclase GB:PROTEIN_ID ABE39149.1 GB:DB_XREF GI:91682847 InterPro:IPR000160 LENGTH 381 SQ:AASEQ MGSTAAISGIPASQADGAEQARTLAVRARRMKQRRYMFDLIAASYLADAALLQIYVFAETIPQIVVPAYIGCGFAIVVASIALSEVGFHDRFKDHYLVLPTTLLNLALVMGFSLWAPQVAFLFICSLFIIFSFVPLRATARQSVMCWTAMTGMLMVLFISTDTPLAMPQGSLLERLGTMLVLVLTVGRCMYIGMYSSALRESLYKRGLQLREAYQRIEEFAELDELTGSYNRRCIMRMLDDEIARADRSAAPLSLALIDLDWFKRINDSFGHPTGDEVLRTFAITIFANIRSFDRFGRYGGEEFLLLLPNTSRDEAHKMLDRLREIVEELDWTAFSPGMRVTLSAGVTAMAPNETAEAVLARADRALYAAKEDGRNKIATT GT:EXON 1|1-381:0| BL:SWS:NREP 1 BL:SWS:REP 210->378|PLED_CAUCR|4e-33|43.8|169/454| TM:NTM 7 TM:REGION 36->58| TM:REGION 65->87| TM:REGION 93->115| TM:REGION 118->140| TM:REGION 142->163| TM:REGION 176->198| TM:REGION 243->264| SEG 97->109|lvlpttllnlalv| SEG 121->133|flficslfiifsf| SEG 176->187|lgtmlvlvltvg| BL:PDB:NREP 1 BL:PDB:REP 210->378|1w25A|1e-33|43.8|169/454| RP:PDB:NREP 1 RP:PDB:REP 209->344|3btaA|5e-42|8.3|133/1277| RP:PFM:NREP 1 RP:PFM:REP 224->376|PF00990|5e-28|49.3|152/160|GGDEF| HM:PFM:NREP 2 HM:PFM:REP 221->377|PF00990|1.7e-44|43.3|157/161|GGDEF| HM:PFM:REP 95->159|PF06942|0.00017|18.5|65/107|GlpM| RP:SCP:NREP 1 RP:SCP:REP 226->379|1w25A3|2e-34|40.3|154/162|d.58.29.2| HM:SCP:REP 226->380|1w25A3|2.1e-51|45.8|155/0|d.58.29.2|1/1|Nucleotide cyclase| OP:NHOMO 8456 OP:NHOMOORG 664 OP:PATTERN -------------------------------------------------------------------- GA34B---111---15211-1G22-111111-C5557D55C99Pk-------635-----763-A2F5433---------9167BJ66--------------------1----------------11111111171BCC8911184lSQEJJ123FF---2--7H9-DDI1------------P8C54981692777775672777777-23332777487E2FI333333AC-1111111111111111111-121-------3311-1-11111-----------------------------------------------5BA7H77787888784G455455948--78A6BHGGD765BA622462--C396993-----16XRS87GXPJST3588378678I-WVLRQANOBU71JPPPWXOVYbGEPF7D8282EEBC784--------CEE3-gAU11111111111111111111111-11111-98E84BA841IFGGIGD7776DDTY888828ISREOGQ-3NMJYJZLOX12nA8URXUIXYbK-------56EKiq5KRHKJOQ9nTMLM1KHLZHOGYQ8778B667G676-11111----------TCINE43ZWHbfZqKkUepgjkhhkbgffVfZcVU*p---AZDg------CGIC3K7DDDCDCCCEB-BDCED89CDCCBCCDDCCEDGDDF--17478777777677787C7876469--E34444433444---S-1-1-FHGFGBpFl---------------9899939-1-HaPOPOYXYXcWWUVRVUY-----2---YPUURWWVVUYWXnnMOLQLQNEFH1111--Y28866DD-1111111517-------------------------B74BA89878-1- -----------------------------------------------------------------------------------------------1--------------------------------------------------------------2----4---------52----------1--8-----7---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 184 STR:RPRED 48.3 SQ:SECSTR #####################################################################################################################################################################################################HHHHHHHHHHHcTTTTccHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHcTccccccTTccTTcccccGGGEEEEEcTTccEEEEEccEEEEEccccTTcEEEccccccccTTTccccccEEEEccccEEcEEccccGTGGTcTTEEEccccccccTHHHHHHHHHHHHHHHTTTcccEEEc DISOP:02AL 1-5,8-22,380-382| PSIPRED cccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccccccHHHHHHHHHHHHHcccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHcHHHHHHHHHHHHHHHHHHHHccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEccEEEEEEcccccHHHHHHHHHHHHHHHHHccEEcccccEEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHcccEEEcc //